RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 SMCPP49901 116 aaPredicted RBP14.46□□□□□ -0.09
NKX6-1-201ENST00000295886 HIST2H2BDQ6DRA6 164 aa14.46□□□□□ -0.09
NKX6-1-201ENST00000295886 ARL17AQ8IVW1 177 aa14.46□□□□□ -0.09
NKX6-1-201ENST00000295886 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 PSMB2P49721 201 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 ZNF876PQ49A33 203 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 CFAP126Q5VTH2 177 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 DLX4Q92988 240 aaPredicted RBP14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 ABCA12Q86UK0 2595 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 MYO9AB2RTY4 2548 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 DEFB136Q30KP8 78 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 A0A0J9YY99 117 aa14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 RPL32P62910 135 aaKnown RBP14.45□□□□□ -0.1
NKX6-1-201ENST00000295886 TEX15Q9BXT5 2789 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 HERVK_113P61574 105 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 NFE4Q86UQ8 179 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 ZNF418Q8TF45 676 aaPredicted RBP14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 PTPN13Q12923 2485 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 P0DMU3 169 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 FAM231AP0DMU4 169 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 FAM231CP0DMU5 169 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 C18orf65Q6ZTR6 163 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 TIMM17AQ99595 171 aa14.44□□□□□ -0.1
NKX6-1-201ENST00000295886 TRAV26-1A0A087WT03 109 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 TMEM238LA0A1B0GVL6 79 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 A6NJY4 79 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 KNCNA6PVL3 124 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 RBMY1A1P0DJD3 496 aaKnown RBP14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 RBMY1CP0DJD4 496 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 HOXD3P31249 432 aaPredicted RBP14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 RBMY1FQ15415 496 aaKnown RBP14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 TMEM141Q96I45 108 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 CDIP1Q9H305 208 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 PROK1P58294 105 aa14.43□□□□□ -0.1
NKX6-1-201ENST00000295886 TSPAN13O95857 204 aa14.42□□□□□ -0.1
NKX6-1-201ENST00000295886 PTH2Q96A98 100 aa14.42□□□□□ -0.1
NKX6-1-201ENST00000295886 GEMIN7Q9H840 131 aaKnown RBP14.42□□□□□ -0.1
NKX6-1-201ENST00000295886 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
NKX6-1-201ENST00000295886 BEX4Q9NWD9 120 aaPredicted RBP14.42□□□□□ -0.1
NKX6-1-201ENST00000295886 TLN2Q9Y4G6 2542 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 TRBV6-5A0A0K0K1A5 114 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 UBE2D1P51668 147 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 LINC01356Q8N9X3 169 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 ATP6V0E2Q8NHE4 81 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 ZNF580Q9UK33 172 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 ZNF462Q96JM2 2506 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 DUX3Q96PT4 197 aa14.41□□□□□ -0.1
NKX6-1-201ENST00000295886 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
NKX6-1-201ENST00000295886 MT-ATP8P03928 68 aa14.4□□□□□ -0.1
NKX6-1-201ENST00000295886 Q9UF83 564 aa14.4□□□□□ -0.1
NKX6-1-201ENST00000295886 J3QQQ9 107 aa14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 SLURP1P55000 103 aa14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 FHL3Q13643 280 aa14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 ODF3Q96PU9 254 aa14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 TRPT1Q86TN4 253 aaKnown RBP14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 AMELXQ99217 191 aa14.39□□□□□ -0.11
NKX6-1-201ENST00000295886 GATA3P23771 443 aa14.38□□□□□ -0.11
NKX6-1-201ENST00000295886 CRYBA4P53673 196 aa14.38□□□□□ -0.11
NKX6-1-201ENST00000295886 CEMP1Q6PRD7 247 aaPredicted RBP14.38□□□□□ -0.11
NKX6-1-201ENST00000295886 A0A0J9YXV3 536 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 RNASE13Q5GAN3 156 aaKnown RBP14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 LGALS3P17931 250 aaKnown RBP14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 DEFB131AP59861 70 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 ZNF702PQ9H963 129 aa14.37□□□□□ -0.11
NKX6-1-201ENST00000295886 A0A096LNT2 108 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 PRB1P04280 392 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 CFC1BP0CG36 223 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 CFC1P0CG37 223 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 XGP55808 180 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 C20orf203Q8NBC4 194 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 VPREB3Q9UKI3 123 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 NAV2Q8IVL1 2488 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 UBE2D3P61077 147 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 UBE2D2P62837 147 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 Q6ZUT4 128 aa14.36□□□□□ -0.11
NKX6-1-201ENST00000295886 SLC25A29Q8N8R3 303 aa14.35□□□□□ -0.11
NKX6-1-201ENST00000295886 CARD19Q96LW7 228 aa14.35□□□□□ -0.11
NKX6-1-201ENST00000295886 I3L3M4 83 aa14.35□□□□□ -0.11
NKX6-1-201ENST00000295886 PPDPFLQ8WWR9 84 aa14.34□□□□□ -0.11
NKX6-1-201ENST00000295886 IGLV4-3A0A075B6K6 122 aa14.34□□□□□ -0.11
NKX6-1-201ENST00000295886 ADARB2-AS1A8MUL3 147 aa14.34□□□□□ -0.11
NKX6-1-201ENST00000295886 ZNF469Q96JG9 3925 aaPredicted RBP14.34□□□□□ -0.11
NKX6-1-201ENST00000295886 CHD6Q8TD26 2715 aa14.34□□□□□ -0.11
NKX6-1-201ENST00000295886 EPG5Q9HCE0 2579 aa14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 TCL1BO95988 128 aa14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 ZNF22P17026 224 aaPredicted RBP14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 RHOHQ15669 191 aa14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 LYRM7Q5U5X0 104 aa14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 TEN1Q86WV5 123 aa14.33□□□□□ -0.11
NKX6-1-201ENST00000295886 TMEM223A0PJW6 202 aa14.33□□□□□ -0.12
NKX6-1-201ENST00000295886 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
NKX6-1-201ENST00000295886 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
NKX6-1-201ENST00000295886 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
NKX6-1-201ENST00000295886 DSCR9P59020 149 aa14.32□□□□□ -0.12
NKX6-1-201ENST00000295886 VCX2Q9H322 139 aa14.32□□□□□ -0.12
NKX6-1-201ENST00000295886 NF1P21359 2839 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms