RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 PMCHL2Q9BQD1 86 aa12.75□□□□□ -0.37
CCDC78-201ENST00000293889 A0A096LNJ9 63 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 HSBP1L1C9JCN9 74 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
CCDC78-201ENST00000293889 SLC25A34Q6PIV7 304 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 PRELID3AQ96N28 172 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 PHLDA3Q9Y5J5 127 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 MUC4Q99102 2169 aa12.74□□□□□ -0.37
CCDC78-201ENST00000293889 NPSP0C0P6 89 aa12.73□□□□□ -0.37
CCDC78-201ENST00000293889 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
CCDC78-201ENST00000293889 SPXQ9BT56 116 aa12.73□□□□□ -0.37
CCDC78-201ENST00000293889 ZMAT4Q9H898 229 aa12.73□□□□□ -0.37
CCDC78-201ENST00000293889 NOP10Q9NPE3 64 aaKnown RBP12.73□□□□□ -0.37
CCDC78-201ENST00000293889 D6R8Y8 96 aa12.73□□□□□ -0.37
CCDC78-201ENST00000293889 PPBPP02775 128 aa12.73□□□□□ -0.37
CCDC78-201ENST00000293889 DAZ2Q13117 558 aaKnown RBP12.73□□□□□ -0.37
CCDC78-201ENST00000293889 M0R2P5 195 aa12.72□□□□□ -0.37
CCDC78-201ENST00000293889 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
CCDC78-201ENST00000293889 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
CCDC78-201ENST00000293889 LGALS9CQ6DKI2 356 aa12.72□□□□□ -0.37
CCDC78-201ENST00000293889 AMN1Q8IY45 258 aa12.72□□□□□ -0.37
CCDC78-201ENST00000293889 hDV102S1A0JD36 115 aa12.71□□□□□ -0.37
CCDC78-201ENST00000293889 M0R381 172 aa12.71□□□□□ -0.37
CCDC78-201ENST00000293889 HINT1P49773 126 aaPredicted RBP12.71□□□□□ -0.37
CCDC78-201ENST00000293889 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.37
CCDC78-201ENST00000293889 COX11Q9Y6N1 276 aa12.71□□□□□ -0.37
CCDC78-201ENST00000293889 CACNG7P62955 275 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
CCDC78-201ENST00000293889 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 IGHV4-4A0A075B6R2 117 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 NXPH4O95158 308 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 COX8AP10176 69 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 ZNF876PQ49A33 203 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 Q6ZTI0 123 aa12.7□□□□□ -0.38
CCDC78-201ENST00000293889 TRGV1A0A0A0MS02 117 aa12.69□□□□□ -0.38
CCDC78-201ENST00000293889 HBDP02042 147 aa12.69□□□□□ -0.38
CCDC78-201ENST00000293889 TWIST1Q15672 202 aa12.69□□□□□ -0.38
CCDC78-201ENST00000293889 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
CCDC78-201ENST00000293889 PTH2Q96A98 100 aa12.69□□□□□ -0.38
CCDC78-201ENST00000293889 PRSS47A8MTI9 375 aa12.68□□□□□ -0.38
CCDC78-201ENST00000293889 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
CCDC78-201ENST00000293889 RASL10AQ92737 203 aa12.68□□□□□ -0.38
CCDC78-201ENST00000293889 C11orf68Q9H3H3 251 aaKnown RBP12.68□□□□□ -0.38
CCDC78-201ENST00000293889 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
CCDC78-201ENST00000293889 A0A0J9YWU9 116 aa12.67□□□□□ -0.38
CCDC78-201ENST00000293889 CKS2P33552 79 aa12.67□□□□□ -0.38
CCDC78-201ENST00000293889 BVES-AS1Q5T3Y7 98 aa12.67□□□□□ -0.38
CCDC78-201ENST00000293889 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
CCDC78-201ENST00000293889 LYRM9A8MSI8 78 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 NCR2O95944 276 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 NPYP01303 97 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 JPT2Q9H910 190 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 CELA1Q9UNI1 258 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 GAGE12BA1L429 117 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 GAGE7O76087 117 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 GAGE12FP0CL80 117 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 GAGE12GP0CL81 117 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 GAGE12IP0CL82 117 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 PIK3CD-AS1Q5SR53 167 aa12.66□□□□□ -0.38
CCDC78-201ENST00000293889 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
CCDC78-201ENST00000293889 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
CCDC78-201ENST00000293889 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
CCDC78-201ENST00000293889 UBE2V1Q13404 147 aa12.65□□□□□ -0.38
CCDC78-201ENST00000293889 LINC00612Q8N6U2 182 aa12.65□□□□□ -0.38
CCDC78-201ENST00000293889 FGF6P10767 208 aa12.64□□□□□ -0.39
CCDC78-201ENST00000293889 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
CCDC78-201ENST00000293889 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
CCDC78-201ENST00000293889 NXT2Q9NPJ8 142 aaKnown RBP12.64□□□□□ -0.39
CCDC78-201ENST00000293889 LOC389332A0A1B0GUA5 103 aa12.63□□□□□ -0.39
CCDC78-201ENST00000293889 SIVA1O15304 175 aa12.63□□□□□ -0.39
CCDC78-201ENST00000293889 EVI2AP22794 236 aa12.63□□□□□ -0.39
CCDC78-201ENST00000293889 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
CCDC78-201ENST00000293889 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 NUDT3O95989 172 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 C14orf178Q8N769 122 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-201ENST00000293889 POM121L12Q8N7R1 296 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 A0A087WWL8 130 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 A8MWV9 139 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 TAX1BP3O14907 124 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 RS1O15537 224 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 FCER1GP30273 86 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 BOD1L2Q8IYS8 172 aa12.62□□□□□ -0.39
CCDC78-201ENST00000293889 TEX48A0A1B0GUV7 120 aa12.61□□□□□ -0.39
CCDC78-201ENST00000293889 CCL25O15444 150 aa12.61□□□□□ -0.39
CCDC78-201ENST00000293889 CRYGDP07320 174 aa12.61□□□□□ -0.39
CCDC78-201ENST00000293889 DAD1P61803 113 aa12.61□□□□□ -0.39
CCDC78-201ENST00000293889 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
CCDC78-201ENST00000293889 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 SMKR1H3BMG3 65 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 SMIM15Q7Z3B0 74 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 Q8N8P6 123 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
CCDC78-201ENST00000293889 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms