RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ZNF479Q96JC4 524 aa7.18□□□□□ -1.26
SNF8-201ENST00000290330 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
SNF8-201ENST00000290330 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 IGHV3-16A0A0C4DH30 117 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 C16orf90A8MZG2 172 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 SIVA1O15304 175 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 MRPL23Q16540 153 aaKnown RBP7.17□□□□□ -1.26
SNF8-201ENST00000290330 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 LINC00518Q8N0U6 118 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 PGLYRP4Q96LB8 373 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 PKD1P98161 4303 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 PCLOQ9Y6V0 5065 aa7.17□□□□□ -1.26
SNF8-201ENST00000290330 F2Z2F3 143 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 M0R2P5 195 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 NXPH4O95158 308 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 CRIP1P50238 77 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 LINC01559Q495D7 138 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 NEGR1Q7Z3B1 354 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 GATD1Q8NB37 220 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 GTSF1Q8WW33 167 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 KCNS1Q96KK3 526 aa7.16□□□□□ -1.26
SNF8-201ENST00000290330 TRAV4A0A0B4J268 109 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 K7EQD1 137 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 ORM1P02763 201 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 ESDP10768 282 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 CAMPP49913 170 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.26
SNF8-201ENST00000290330 LINC00315P59091 139 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 DNLZQ5SXM8 178 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 BAGE3Q86Y29 109 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 FER1L6-AS1Q8NA97 138 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 OR4C5Q8NGB2 326 aa7.15□□□□□ -1.26
SNF8-201ENST00000290330 PACRGQ96M98 296 aaPredicted RBP7.15□□□□□ -1.26
SNF8-201ENST00000290330 GYPEP15421 78 aa7.14□□□□□ -1.27
SNF8-201ENST00000290330 SRIP30626 198 aa7.14□□□□□ -1.27
SNF8-201ENST00000290330 CTRLP40313 264 aa7.14□□□□□ -1.27
SNF8-201ENST00000290330 Q6ZRN7 208 aaPredicted RBP7.14□□□□□ -1.27
SNF8-201ENST00000290330 SPATA12Q7Z6I5 190 aa7.14□□□□□ -1.27
SNF8-201ENST00000290330 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
SNF8-201ENST00000290330 RYR1P21817 5038 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 GZMBP10144 247 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 FABP4P15090 132 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 KRTAP10-2P60368 255 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 C12orf57Q99622 126 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 TPPP3Q9BW30 176 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
SNF8-201ENST00000290330 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 IGLC6P0CF74 106 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 CACNG7P62955 275 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 ZNF876PQ49A33 203 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 LYZL1Q6UWQ5 148 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 SMIM15Q7Z3B0 74 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 WFDC10BQ8IUB3 73 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 ALKBH7Q9BT30 221 aaPredicted RBP7.12□□□□□ -1.27
SNF8-201ENST00000290330 CNFNQ9BYD5 112 aa7.12□□□□□ -1.27
SNF8-201ENST00000290330 TMSB15BA0A087X1C1 80 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 GRIFINA4D1Z8 144 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 GATA1P15976 413 aaPredicted RBP7.11□□□□□ -1.27
SNF8-201ENST00000290330 PDZD11Q5EBL8 140 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 C9orf85Q96MD7 179 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 SAMD10Q9BYL1 202 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
SNF8-201ENST00000290330 TRAV9-2A0A087WT02 112 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 IFITM10A6NMD0 228 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 K7EP13 123 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 RS1O15537 224 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 CIDEAO60543 219 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 SERF1AO75920 110 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 PPBPP02775 128 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 OR5AL1P0C617 328 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
SNF8-201ENST00000290330 RAB4AP20338 218 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 PMCHP20382 165 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 TWIST1Q15672 202 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 KIAA1644Q3SXP7 199 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 CFAP126Q5VTH2 177 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 SLC25A29Q8N8R3 303 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 C18orf32Q8TCD1 76 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 PTH2Q96A98 100 aa7.1□□□□□ -1.27
SNF8-201ENST00000290330 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
SNF8-201ENST00000290330 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
SNF8-201ENST00000290330 IGKV3D-20A0A0C4DH25 116 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 TRBV6-4A0A1B0GX49 114 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 EVI2AP22794 236 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 ASIPP42127 132 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 TIRAPP58753 221 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 S100A12P80511 92 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
SNF8-201ENST00000290330 IGHV3-73A0A0B4J1V6 119 aa7.08□□□□□ -1.28
SNF8-201ENST00000290330 SNAI2O43623 268 aa7.08□□□□□ -1.28
SNF8-201ENST00000290330 HSBP1O75506 76 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms