RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 A8MWL6 223 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 XGP55808 180 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 RHOHQ15669 191 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 COX19Q49B96 90 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 LINC01556Q5JQF7 62 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 UFSP1Q6NVU6 142 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 TSKUQ8WUA8 353 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 ZC2HC1AQ96GY0 325 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 PRADC1Q9BSG0 188 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 SAMD10Q9BYL1 202 aa6.4□□□□□ -1.38
HMHB1-201ENST00000289448 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.38
HMHB1-201ENST00000289448 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.39
HMHB1-201ENST00000289448 LRCOL1A6NCL2 159 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 FAM231BA6NCW3 169 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 FABP5P3A8MUU1 101 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 EREGO14944 169 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 CIDEAO60543 219 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 FAM162BQ5T6X4 162 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 Q8N3U1 123 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 GFRA4Q9GZZ7 299 aa6.39□□□□□ -1.39
HMHB1-201ENST00000289448 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
HMHB1-201ENST00000289448 GRIFINA4D1Z8 144 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 TRGC2P03986 189 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 LINC00694P0DN24 101 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 S100A4P26447 101 aaKnown RBP6.38□□□□□ -1.39
HMHB1-201ENST00000289448 ASIPP42127 132 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 OR10J3Q5JRS4 329 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 LELP1Q5T871 98 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 DMRTA1Q5VZB9 504 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 WDR73Q6P4I2 378 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 C14orf178Q8N769 122 aaPredicted RBP6.38□□□□□ -1.39
HMHB1-201ENST00000289448 OR2D3Q8NGH3 330 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 ATP6V0E2Q8NHE4 81 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 GTSF1LQ9H1H1 148 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
HMHB1-201ENST00000289448 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 LOC105371267A0A1B0GV96 52 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 XKRY2A2RUG3 117 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 GAGE12JA6NER3 117 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 H3BVH4 76 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 PHOX2AO14813 284 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 SH2D1AO60880 128 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 MT-ND6P03923 174 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 ARMS2P0C7Q2 107 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
HMHB1-201ENST00000289448 GAGE1Q13065 139 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 GAGE4Q13068 117 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 GAGE5Q13069 117 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 GAGE13Q4V321 117 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 PIK3CD-AS1Q5SR53 167 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 RASL11AQ6T310 242 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 ZFP2Q6ZN57 461 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 Q9HAA7 133 aa6.37□□□□□ -1.39
HMHB1-201ENST00000289448 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 A8MWV9 139 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 S100A6P06703 90 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 FOXA3P55318 350 aaPredicted RBP6.36□□□□□ -1.39
HMHB1-201ENST00000289448 DNLZQ5SXM8 178 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
HMHB1-201ENST00000289448 A0A087WWL8 130 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 TMSB15BA0A087X1C1 80 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 EPM2AB3EWF7 344 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 PSCAO43653 123 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 GCSHP23434 173 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HAMPP81172 84 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 WFDC2Q14508 124 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
HMHB1-201ENST00000289448 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 FRZBQ92765 325 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
HMHB1-201ENST00000289448 A0A1B0GXF2 115 aa6.34□□□□□ -1.39
HMHB1-201ENST00000289448 TRGC1P0CF51 173 aa6.34□□□□□ -1.39
HMHB1-201ENST00000289448 FABP9Q0Z7S8 132 aa6.34□□□□□ -1.39
HMHB1-201ENST00000289448 LINC01559Q495D7 138 aa6.34□□□□□ -1.39
HMHB1-201ENST00000289448 MRPL54Q6P161 138 aaKnown RBP6.34□□□□□ -1.39
HMHB1-201ENST00000289448 DAZ4Q86SG3 579 aaKnown RBP6.34□□□□□ -1.39
HMHB1-201ENST00000289448 Q8N814 137 aa6.34□□□□□ -1.39
HMHB1-201ENST00000289448 DAZ3Q9NR90 486 aaKnown RBP6.34□□□□□ -1.39
HMHB1-201ENST00000289448 IGLV5-52A0A0A0MRZ9 124 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms