RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TMEM61Q8N0U2 210 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 D6R8Y8 96 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 ATP5G1P05496 136 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 JOSD1Q15040 202 aaPredicted RBP6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 AMN1Q8IY45 258 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 SPATA3Q8NHX4 192 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 RMI2Q96E14 147 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 F2Z2F3 143 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 C10orf91Q5T1B1 145 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 ERASQ7Z444 233 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 GYPEP15421 78 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 BEAN1Q3B7T3 259 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 A0A1B0GV90 55 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 C15orf53Q8NAA6 179 aa6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 MORN3Q6PF18 240 aaPredicted RBP6.29□□□□□ -1.4
PTPDC1-201ENST00000288976 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 VCYO14598 125 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 GAGE2EQ4V326 116 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 C5orf38Q86SI9 138 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 GAGE2DQ9UEU5 116 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 A8MTW9 85 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 AMBPP02760 352 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 ORMDL2Q53FV1 153 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 C9orf47Q6ZRZ4 202 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 LENEPQ9Y5L5 61 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 COX8CQ7Z4L0 72 aa6.28□□□□□ -1.4
PTPDC1-201ENST00000288976 RHODO00212 210 aa6.27□□□□□ -1.4
PTPDC1-201ENST00000288976 CARHSP1Q9Y2V2 147 aaKnown RBP6.27□□□□□ -1.4
PTPDC1-201ENST00000288976 TEX48A0A1B0GUV7 120 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 EGFEM1PQ0D2K5 195 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 GAGE10A6NGK3 116 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 RASL11AQ6T310 242 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 LTAP01374 205 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 MAP6D1Q9H9H5 199 aa6.27□□□□□ -1.41
PTPDC1-201ENST00000288976 PPBPP02775 128 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 FAM19A4Q96LR4 140 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 NF1P21359 2839 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 GNRH2O43555 120 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 Q86TA4 180 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 MDFIQ99750 246 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 KLK12Q9UKR0 248 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 TRAV26-2A0A0B4J265 109 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 IGLV2-11P01706 119 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 TMEM242Q9NWH2 141 aa6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
PTPDC1-201ENST00000288976 IZUMO1RA6ND01 250 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 TAL2Q16559 108 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 RASL10AQ92737 203 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 A0A0J9YX75 114 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 C9JQL5 133 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 SEC11AP67812 179 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 PMVKQ15126 192 aa6.25□□□□□ -1.41
PTPDC1-201ENST00000288976 A8MWV9 139 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 SERF1AO75920 110 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 SLAQ13239 276 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 COL5A1-AS1Q5SY13 56 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 KPRPQ5T749 579 aaPredicted RBP6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 ZNF492Q9P255 531 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 A0A096LNI7 61 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 PKIAP61925 76 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 DEFB105AQ8NG35 78 aa6.24□□□□□ -1.41
PTPDC1-201ENST00000288976 DPM2O94777 84 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 DDTP30046 118 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 LAGE3Q14657 143 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 RHOHQ15669 191 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 ODF3L2Q3SX64 289 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 ESDP10768 282 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 NAA38Q9BRA0 125 aaKnown RBP6.23□□□□□ -1.41
PTPDC1-201ENST00000288976 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms