RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZANQ9Y493 2812 aa11.94□□□□□ -0.5
SMAD6-201ENST00000288840 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 PROK1P58294 105 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
SMAD6-201ENST00000288840 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
SMAD6-201ENST00000288840 C18orf65Q6ZTR6 163 aa11.92□□□□□ -0.5
SMAD6-201ENST00000288840 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
SMAD6-201ENST00000288840 Q96MF0 132 aa11.92□□□□□ -0.5
SMAD6-201ENST00000288840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-201ENST00000288840 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SMAD6-201ENST00000288840 J3QQQ9 107 aa11.92□□□□□ -0.5
SMAD6-201ENST00000288840 STHQ8IWL8 128 aa11.92□□□□□ -0.5
SMAD6-201ENST00000288840 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
SMAD6-201ENST00000288840 PTH2Q96A98 100 aa11.91□□□□□ -0.5
SMAD6-201ENST00000288840 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
SMAD6-201ENST00000288840 SRSF2Q01130 221 aaKnown RBP11.91□□□□□ -0.5
SMAD6-201ENST00000288840 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
SMAD6-201ENST00000288840 TRPT1Q86TN4 253 aaKnown RBP11.91□□□□□ -0.5
SMAD6-201ENST00000288840 U3KQE9 123 aa11.91□□□□□ -0.5
SMAD6-201ENST00000288840 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
SMAD6-201ENST00000288840 AZU1P20160 251 aa11.9□□□□□ -0.5
SMAD6-201ENST00000288840 RRN3P1Q2M238 152 aa11.9□□□□□ -0.5
SMAD6-201ENST00000288840 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
SMAD6-201ENST00000288840 CUBNO60494 3623 aa11.9□□□□□ -0.5
SMAD6-201ENST00000288840 DLX4Q92988 240 aaPredicted RBP11.9□□□□□ -0.5
SMAD6-201ENST00000288840 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
SMAD6-201ENST00000288840 PRORYQ9H606 182 aa11.89□□□□□ -0.51
SMAD6-201ENST00000288840 UTP20O75691 2785 aaKnown RBP11.89□□□□□ -0.51
SMAD6-201ENST00000288840 TRGV2A0A075B6R0 118 aa11.89□□□□□ -0.51
SMAD6-201ENST00000288840 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
SMAD6-201ENST00000288840 A0A0J9YX75 114 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 I3L3M4 83 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 HIGD1BQ9P298 99 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 H3BUA1 57 aa11.88□□□□□ -0.51
SMAD6-201ENST00000288840 IGLV2-18A0A075B6J9 118 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 C9JAW5 83 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 HIST2H2BCQ6DN03 193 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 DAND5Q8N907 189 aa11.87□□□□□ -0.51
SMAD6-201ENST00000288840 E9PLD3 99 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 IGSF10Q6WRI0 2623 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 DSCR9P59020 149 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
SMAD6-201ENST00000288840 UBE2L6O14933 153 aa11.85□□□□□ -0.51
SMAD6-201ENST00000288840 YAE1D1Q9NRH1 226 aa11.85□□□□□ -0.51
SMAD6-201ENST00000288840 TRAV12-1A0A0B4J245 112 aa11.85□□□□□ -0.51
SMAD6-201ENST00000288840 A8MWV9 139 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 ZNF415Q09FC8 603 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 TMEM141Q96I45 108 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 A4D1N5 150 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 GATA3P23771 443 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 DCANP1Q8TF63 244 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 ATP6V0BQ99437 205 aa11.84□□□□□ -0.51
SMAD6-201ENST00000288840 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 A8MZ25 164 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 LINC01619G3V211 115 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE4Q13068 117 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE5Q13069 117 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 F8W1H4 67 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 COX6CP09669 75 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 KRTAP10-9P60411 292 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
SMAD6-201ENST00000288840 FLNAP21333 2647 aaKnown RBP11.83□□□□□ -0.52
SMAD6-201ENST00000288840 G3V4G9 280 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 TAL2Q16559 108 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 K7EMT4 169 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 INSL3P51460 131 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 C19orf54Q5BKX5 351 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
SMAD6-201ENST00000288840 TEX15Q9BXT5 2789 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 ELANEP08246 267 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 PSMB8P28062 276 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 PRO1854Q9UHT4 67 aa11.82□□□□□ -0.52
SMAD6-201ENST00000288840 K7EQG2 157 aa11.81□□□□□ -0.52
SMAD6-201ENST00000288840 MUC4Q99102 2169 aa11.81□□□□□ -0.52
SMAD6-201ENST00000288840 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
SMAD6-201ENST00000288840 HECTD1Q9ULT8 2610 aa11.81□□□□□ -0.52
SMAD6-201ENST00000288840 MUSTN1Q8IVN3 82 aa11.81□□□□□ -0.52
SMAD6-201ENST00000288840 TMEM262E9PQX1 116 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 SOCS3O14543 225 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 ZNF575Q86XF7 245 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 SPAG8Q99932 426 aaPredicted RBP11.8□□□□□ -0.52
SMAD6-201ENST00000288840 IGHV4-4A0A075B6R2 117 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 INSP01308 110 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms