RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DNAJC9-AS1A6NH13 148 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 H0Y9J4 135 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 WDR81Q562E7 1941 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 CTRLP40313 264 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 SEM1Q6ZVN7 128 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 TMEM61Q8N0U2 210 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 ZNF747Q9BV97 191 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 TNFRSF13BO14836 293 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-201ENST00000283254 FSTL3O95633 263 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 PSMB8P28062 276 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 PRR31Q5SQ13 230 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 DUX4L9Q6RFH8 374 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-201ENST00000283254 APRG1Q8IVJ8 170 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 NTN5Q8WTR8 489 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-201ENST00000283254 PROK2Q9HC23 129 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 LINC00474Q9P2X8 69 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 PLXND1Q9Y4D7 1925 aa3.15□□□□□ -1.91
SCN3A-201ENST00000283254 HELZP42694 1942 aaKnown RBP3.14□□□□□ -1.91
SCN3A-201ENST00000283254 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 I3L2K1 104 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 TMEM256-PLSCR3K7ERE1 68 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
SCN3A-201ENST00000283254 MGAMO43451 1857 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 TANC1Q9C0D5 1861 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 KIAA1671Q9BY89 1806 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 A0A0J9YX75 114 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 BAHCC1Q9P281 2608 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 IGHV4-4A0A075B6R2 117 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 GAGE12HA6NDE8 117 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 LGALS9O00182 355 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 TAX1BP3O14907 124 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 MIFP14174 115 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 J3KT08 172 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 GNRH2O43555 120 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 LINC00205P59089 165 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 IGHV4OR15-8A0A075B7B6 117 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 A0A087WW49 117 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 IGHV4-28A0A0C4DH34 117 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 POLR3KQ9Y2Y1 108 aaPredicted RBP3.14□□□□□ -1.91
SCN3A-201ENST00000283254 BLCAPP62952 87 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 C12orf74Q32Q52 190 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 MUC7Q8TAX7 377 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 ANAPC1Q9H1A4 1944 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
SCN3A-201ENST00000283254 NUP210Q8TEM1 1887 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-201ENST00000283254 TRAV10A0A0B4J240 114 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 TRBV6-1A0A0K0K1D8 114 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 LECT2O14960 151 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 GRNP28799 593 aaKnown RBP3.13□□□□□ -1.91
SCN3A-201ENST00000283254 C20orf203Q8NBC4 194 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 ZNF581Q9P0T4 197 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 C11orf86A6NJI1 115 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 CRYGDP07320 174 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 MIAQ16674 131 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 A0A087WZ39 114 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 IGLV3-1P01715 115 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 HIGD2AQ9BW72 106 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 IGLL1P15814 213 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 TSC2P49815 1807 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 H3BMG7 143 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 A0A0B4J2C4 111 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 SIP14410 1827 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 UBE2D1P51668 147 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 ADORA2A-AS1P86434 159 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 REG3AQ06141 175 aa3.13□□□□□ -1.91
SCN3A-201ENST00000283254 RLFQ13129 1914 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 A0A0J9YXY3 114 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 DIAPH2-AS1Q14236 149 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 PLXNA2O75051 1894 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 BPY2O14599 106 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-201ENST00000283254 ZNF503-AS2A6NEH8 195 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 C11orf53Q8IXP5 236 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 Q8N9W7 124 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 K7ERJ3 54 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 ODF1Q14990 250 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 SIRPDQ9H106 197 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 DKK2Q9UBU2 259 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 SPANXB1Q9NS25 103 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-201ENST00000283254 TEX22C9J3V5 150 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 ZNF726P1Q15940 193 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 TOMM6Q96B49 74 aa3.12□□□□□ -1.91
SCN3A-201ENST00000283254 TCL1BO95988 128 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 MAP6D1Q9H9H5 199 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 CENPEQ02224 2701 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 UBE2D4Q9Y2X8 147 aa3.11□□□□□ -1.91
SCN3A-201ENST00000283254 NOTCH4Q99466 2003 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms