RNA–Protein interactions for RNA: ENST00000275015.9

NFKBIE-201, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 1 (best) BASIC

Gene NFKBIE, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-201ENST00000275015 SLURP1P55000 103 aa17.39■□□□□ 0.37
NFKBIE-201ENST00000275015 WFDC2Q14508 124 aa17.39■□□□□ 0.37
NFKBIE-201ENST00000275015 SETD2Q9BYW2 2564 aaPredicted RBP17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 IGHV3-73A0A0B4J1V6 119 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 J3QLI3 93 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 TSPEAR-AS2P59090 65 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 UBE2E2Q96LR5 201 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 NF1P21359 2839 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 ELANEP08246 267 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 Q6YL49 198 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 CHD6Q8TD26 2715 aa17.38■□□□□ 0.37
NFKBIE-201ENST00000275015 A0A1B0GWB2 263 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 DUX3Q96PT4 197 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 P0DMU3 169 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 FAM231AP0DMU4 169 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 FAM231CP0DMU5 169 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 SFTA2Q6UW10 78 aa17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 UBR5O95071 2799 aaPredicted RBP17.37■□□□□ 0.37
NFKBIE-201ENST00000275015 KRTAP10-9P60411 292 aa17.36■□□□□ 0.37
NFKBIE-201ENST00000275015 PGPEP1Q9NXJ5 209 aa17.36■□□□□ 0.37
NFKBIE-201ENST00000275015 HERVK_113P61574 105 aa17.35■□□□□ 0.37
NFKBIE-201ENST00000275015 DEFB131AP59861 70 aa17.35■□□□□ 0.37
NFKBIE-201ENST00000275015 PAPPA-AS1Q5QFB9 102 aa17.35■□□□□ 0.37
NFKBIE-201ENST00000275015 TRPT1Q86TN4 253 aaKnown RBP17.35■□□□□ 0.37
NFKBIE-201ENST00000275015 NBPF19A0A087WUL8 3843 aa17.35■□□□□ 0.37
NFKBIE-201ENST00000275015 LINC01549A6NIU2 74 aa17.34■□□□□ 0.37
NFKBIE-201ENST00000275015 IGHV4-31P0DP07 118 aa17.34■□□□□ 0.37
NFKBIE-201ENST00000275015 PROK1P58294 105 aa17.34■□□□□ 0.37
NFKBIE-201ENST00000275015 MRPL16Q9NX20 251 aaKnown RBP17.34■□□□□ 0.37
NFKBIE-201ENST00000275015 A0A0J9YY99 117 aa17.34■□□□□ 0.37
NFKBIE-201ENST00000275015 AKAP9Q99996 3911 aa17.33■□□□□ 0.36
NFKBIE-201ENST00000275015 CCDC168Q8NDH2 2452 aa17.33■□□□□ 0.36
NFKBIE-201ENST00000275015 SH2D6Q7Z4S9 175 aa17.33■□□□□ 0.36
NFKBIE-201ENST00000275015 NOTCH3Q9UM47 2321 aa17.32■□□□□ 0.36
NFKBIE-201ENST00000275015 APOMO95445 188 aa17.32■□□□□ 0.36
NFKBIE-201ENST00000275015 FSHBP01225 129 aa17.32■□□□□ 0.36
NFKBIE-201ENST00000275015 NSUN5P1Q3KNT7 163 aa17.32■□□□□ 0.36
NFKBIE-201ENST00000275015 IGHV3-64A0A075B6Q5 118 aa17.31■□□□□ 0.36
NFKBIE-201ENST00000275015 F8W1H4 67 aa17.31■□□□□ 0.36
NFKBIE-201ENST00000275015 WNK1Q9H4A3 2382 aa17.31■□□□□ 0.36
NFKBIE-201ENST00000275015 ETDBQ3ZM63 59 aa17.31■□□□□ 0.36
NFKBIE-201ENST00000275015 C20orf203Q8NBC4 194 aa17.31■□□□□ 0.36
NFKBIE-201ENST00000275015 TRGV11A0A075B6L2 103 aa17.3■□□□□ 0.36
NFKBIE-201ENST00000275015 I3L3M4 83 aa17.3■□□□□ 0.36
NFKBIE-201ENST00000275015 Q9UF83 564 aa17.3■□□□□ 0.36
NFKBIE-201ENST00000275015 KHDC1LQ5JSQ8 128 aa17.3■□□□□ 0.36
NFKBIE-201ENST00000275015 BBC3Q96PG8 261 aaPredicted RBP17.3■□□□□ 0.36
NFKBIE-201ENST00000275015 APCP25054 2843 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 RBMY1BA6NDE4 496 aaKnown RBP17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 RBMY1EA6NEQ0 496 aaKnown RBP17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 RBMY1DP0C7P1 496 aaKnown RBP17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 UBE2D1P51668 147 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 RHOHQ15669 191 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 NIPBLQ6KC79 2804 aaeCLIP17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 TMEM238LA0A1B0GVL6 79 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 A6NJY4 79 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 J3QQQ9 107 aa17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 SPANXB1Q9NS25 103 aaPredicted RBP17.29■□□□□ 0.36
NFKBIE-201ENST00000275015 CR1P17927 2039 aa17.28■□□□□ 0.36
NFKBIE-201ENST00000275015 GAGE13Q4V321 117 aa17.28■□□□□ 0.36
NFKBIE-201ENST00000275015 TMEM61Q8N0U2 210 aa17.28■□□□□ 0.36
NFKBIE-201ENST00000275015 AMELXQ99217 191 aa17.28■□□□□ 0.36
NFKBIE-201ENST00000275015 RNF152Q8N8N0 203 aa17.28■□□□□ 0.36
NFKBIE-201ENST00000275015 H3BMM0 161 aa17.27■□□□□ 0.35
NFKBIE-201ENST00000275015 LOC107984156A0A0G2JMH3 177 aa17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 A0A0J9YXV3 536 aa17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 TSPAN13O95857 204 aa17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 ARL17AQ8IVW1 177 aa17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 LGALS3P17931 250 aaKnown RBP17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 CEMP1Q6PRD7 247 aaPredicted RBP17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 PRO0461Q9UI25 63 aa17.26■□□□□ 0.35
NFKBIE-201ENST00000275015 NFE4Q86UQ8 179 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 SLC25A29Q8N8R3 303 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 PRRC2AP48634 2157 aaKnown RBP17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 ITPR3Q14573 2671 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 IGLV4-3A0A075B6K6 122 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 IGHV3-30P01768 117 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 IGHV3-30-5P0DP03 117 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 VCX2Q9H322 139 aa17.25■□□□□ 0.35
NFKBIE-201ENST00000275015 Q5PR19 223 aa17.24■□□□□ 0.35
NFKBIE-201ENST00000275015 SPAG8Q99932 426 aaPredicted RBP17.24■□□□□ 0.35
NFKBIE-201ENST00000275015 NDUFA11Q86Y39 141 aa17.24■□□□□ 0.35
NFKBIE-201ENST00000275015 RNASE13Q5GAN3 156 aaKnown RBP17.23■□□□□ 0.35
NFKBIE-201ENST00000275015 Q6ZSN1 163 aa17.23■□□□□ 0.35
NFKBIE-201ENST00000275015 TMEM223A0PJW6 202 aa17.23■□□□□ 0.35
NFKBIE-201ENST00000275015 ZNF22P17026 224 aaPredicted RBP17.23■□□□□ 0.35
NFKBIE-201ENST00000275015 DLX4Q92988 240 aaPredicted RBP17.22■□□□□ 0.35
NFKBIE-201ENST00000275015 RHODO00212 210 aa17.21■□□□□ 0.35
NFKBIE-201ENST00000275015 CFC1BP0CG36 223 aa17.21■□□□□ 0.35
NFKBIE-201ENST00000275015 CFC1P0CG37 223 aa17.21■□□□□ 0.35
NFKBIE-201ENST00000275015 PSMB2P49721 201 aa17.21■□□□□ 0.35
NFKBIE-201ENST00000275015 INSL3P51460 131 aa17.21■□□□□ 0.35
NFKBIE-201ENST00000275015 JMJD1CQ15652 2540 aa17.2■□□□□ 0.34
NFKBIE-201ENST00000275015 CD28P10747 220 aa17.2■□□□□ 0.34
NFKBIE-201ENST00000275015 FAM104AQ969W3 186 aa17.2■□□□□ 0.34
NFKBIE-201ENST00000275015 Q96MF0 132 aa17.2■□□□□ 0.34
NFKBIE-201ENST00000275015 SPXQ9BT56 116 aa17.19■□□□□ 0.34
NFKBIE-201ENST00000275015 TNFRSF18Q9Y5U5 241 aa17.19■□□□□ 0.34
NFKBIE-201ENST00000275015 C2CD3Q4AC94 2353 aa17.19■□□□□ 0.34
NFKBIE-201ENST00000275015 NACAE9PAV3 2078 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms