RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FHITP49789 147 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 HIST1H2BAQ96A08 127 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 RMI2Q96E14 147 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 MUC21A0A0G2JKD1 596 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 MUC21A0A140T8X8 626 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 USP17L23D6RBM5 183 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 GIPP09681 153 aaPredicted RBP5.74□□□□□ -1.49
TPM3-201ENST00000271850 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 ZFP82Q8N141 532 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 C15orf54Q8N8G6 183 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 FMC1Q96HJ9 113 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 MED28Q9H204 178 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 ZFP30Q9Y2G7 519 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 PHLDA3Q9Y5J5 127 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 KIF25-AS1Q9Y6Z4 181 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 URGCP-MRPS24S4R325 110 aa5.74□□□□□ -1.49
TPM3-201ENST00000271850 A0A087WX48 190 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 FXYD6-FXYD2A0A087WZ82 144 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 MAP1LC3B2A6NCE7 125 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 SNAI2O43623 268 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 TPT1P13693 172 aaKnown RBP5.73□□□□□ -1.49
TPM3-201ENST00000271850 RPL36AP83881 106 aaKnown RBP5.73□□□□□ -1.49
TPM3-201ENST00000271850 RPL36ALQ969Q0 106 aaKnown RBP5.73□□□□□ -1.49
TPM3-201ENST00000271850 MLST8Q9BVC4 326 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 C1orf43Q9BWL3 253 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 MAP1LC3BQ9GZQ8 125 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
TPM3-201ENST00000271850 PTTG1O95997 202 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 HLA-DQA1P01909 254 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 SLPIP03973 132 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 RAB4BP61018 213 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 RPL37AP61513 92 aaKnown RBP5.72□□□□□ -1.49
TPM3-201ENST00000271850 Q0VG73 95 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 SDIM1Q6ZPB5 146 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 NKX6-2Q9C056 277 aaPredicted RBP5.72□□□□□ -1.49
TPM3-201ENST00000271850 GFRA4Q9GZZ7 299 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 VAX2Q9UIW0 290 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 PLA2G2DQ9UNK4 145 aa5.72□□□□□ -1.49
TPM3-201ENST00000271850 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 TMEM262E9PQX1 116 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 SMLR1H3BR10 107 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 PAGE4O60829 102 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 ANGP03950 147 aaKnown RBP5.71□□□□□ -1.5
TPM3-201ENST00000271850 UBE2G1P62253 170 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 RBX1P62877 108 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
TPM3-201ENST00000271850 ELOBQ15370 118 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 ZNF56Q15929 161 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 AKR1C8PQ5T2L2 129 aa5.71□□□□□ -1.5
TPM3-201ENST00000271850 INO80EQ8NBZ0 244 aaPredicted RBP5.71□□□□□ -1.5
TPM3-201ENST00000271850 BORCS7-ASMTA0A0B4J1R7 106 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 CXCL1P09341 107 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 OR5AL1P0C617 328 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 SEC11BP0C7V7 166 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 AKR1C3P42330 323 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 CST9LP1Q5W188 147 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 C20orf203Q8NBC4 194 aa5.7□□□□□ -1.5
TPM3-201ENST00000271850 ZNF471Q9BX82 626 aaPredicted RBP5.7□□□□□ -1.5
TPM3-201ENST00000271850 A0A1B0GV50 99 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 ARPC5O15511 151 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 CRPP02741 224 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 GAGE6Q13070 117 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 MIAQ16674 131 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 TCEAL7Q9BRU2 100 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 CHCHD5Q9BSY4 110 aa5.69□□□□□ -1.5
TPM3-201ENST00000271850 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 M0QY20 66 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 CHTF8P0CG12 524 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 GZMBP10144 247 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 SSTP61278 116 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
TPM3-201ENST00000271850 ODF1Q14990 250 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 MBD3L1Q8WWY6 194 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 DERL1Q9BUN8 251 aa5.68□□□□□ -1.5
TPM3-201ENST00000271850 IGLC6P0CF74 106 aa5.67□□□□□ -1.5
TPM3-201ENST00000271850 CCL20P78556 96 aa5.67□□□□□ -1.5
TPM3-201ENST00000271850 KCNIP4Q6PIL6 250 aa5.67□□□□□ -1.5
TPM3-201ENST00000271850 BAGE2Q86Y30 109 aa5.67□□□□□ -1.5
TPM3-201ENST00000271850 STOML3Q8TAV4 291 aa5.67□□□□□ -1.5
TPM3-201ENST00000271850 REG3AQ06141 175 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 SPANXN1Q5VSR9 72 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 KCNRGQ8N5I3 272 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 FAM213BQ8TBF2 198 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 SFT2D1Q8WV19 159 aa5.66□□□□□ -1.5
TPM3-201ENST00000271850 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
TPM3-201ENST00000271850 A0A087WYN8 130 aa5.65□□□□□ -1.5
TPM3-201ENST00000271850 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
TPM3-201ENST00000271850 F5H697 171 aa5.65□□□□□ -1.5
TPM3-201ENST00000271850 RPL35P42766 123 aaKnown RBP5.65□□□□□ -1.5
TPM3-201ENST00000271850 C15orf56Q8N910 161 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms