RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 HLA-DQA1P01909 254 aa9.89□□□□□ -0.83
SOD1-201ENST00000270142 S100A9P06702 114 aaKnown RBP9.89□□□□□ -0.83
SOD1-201ENST00000270142 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
SOD1-201ENST00000270142 NTM-AS1Q6ZSK4 140 aa9.89□□□□□ -0.83
SOD1-201ENST00000270142 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
SOD1-201ENST00000270142 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
SOD1-201ENST00000270142 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
SOD1-201ENST00000270142 PFDN1O60925 122 aa9.88□□□□□ -0.83
SOD1-201ENST00000270142 OR5AL1P0C617 328 aa9.88□□□□□ -0.83
SOD1-201ENST00000270142 SSTP61278 116 aa9.88□□□□□ -0.83
SOD1-201ENST00000270142 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
SOD1-201ENST00000270142 F5H697 171 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 PKIAP61925 76 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 ZNF345Q14585 488 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 MIAQ16674 131 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.87□□□□□ -0.83
SOD1-201ENST00000270142 VAX2Q9UIW0 290 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
SOD1-201ENST00000270142 UMAD1C9J7I0 102 aa9.86□□□□□ -0.83
SOD1-201ENST00000270142 PRSS1P07477 247 aa9.86□□□□□ -0.83
SOD1-201ENST00000270142 RBX1P62877 108 aa9.86□□□□□ -0.83
SOD1-201ENST00000270142 GAGE6Q13070 117 aa9.86□□□□□ -0.83
SOD1-201ENST00000270142 DERL1Q9BUN8 251 aa9.86□□□□□ -0.83
SOD1-201ENST00000270142 OXTP01178 125 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 AP1S3Q96PC3 154 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
SOD1-201ENST00000270142 SMIM17P0DL12 118 aa9.84□□□□□ -0.83
SOD1-201ENST00000270142 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
SOD1-201ENST00000270142 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
SOD1-201ENST00000270142 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
SOD1-201ENST00000270142 TRBV25-1A0A075B6N4 114 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 BCL2L11O43521 198 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 H2AFB1P0C5Y9 115 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 RPL35P42766 123 aaKnown RBP9.83□□□□□ -0.84
SOD1-201ENST00000270142 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 DGAT2L7PQ6IED9 249 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
SOD1-201ENST00000270142 MGPP08493 103 aa9.82□□□□□ -0.84
SOD1-201ENST00000270142 GZMBP10144 247 aa9.82□□□□□ -0.84
SOD1-201ENST00000270142 HNRNPA3P51991 378 aaKnown RBP9.82□□□□□ -0.84
SOD1-201ENST00000270142 IQCJQ1A5X6 159 aa9.82□□□□□ -0.84
SOD1-201ENST00000270142 TMA7Q9Y2S6 64 aaKnown RBP9.82□□□□□ -0.84
SOD1-201ENST00000270142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
SOD1-201ENST00000270142 IGHV1-24A0A0C4DH33 117 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 HMSDA8MTL9 139 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 PANO1I0J062 215 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 M0QY20 66 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 IGLC6P0CF74 106 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 SUMO4Q6EEV6 95 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 C11orf52Q96A22 123 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 DAZAP1Q96EP5 407 aaKnown RBP9.81□□□□□ -0.84
SOD1-201ENST00000270142 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
SOD1-201ENST00000270142 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 A0A0D9SG52 128 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 CCL20P78556 96 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 REG3AQ06141 175 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 CENPWQ5EE01 88 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 FER1L6-AS1Q8NA97 138 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
SOD1-201ENST00000270142 OR2D3Q8NGH3 330 aa9.79□□□□□ -0.84
SOD1-201ENST00000270142 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
SOD1-201ENST00000270142 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
SOD1-201ENST00000270142 H7C1H1 209 aa9.78□□□□□ -0.84
SOD1-201ENST00000270142 NKX2-5P52952 324 aaPredicted RBP9.78□□□□□ -0.84
SOD1-201ENST00000270142 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
SOD1-201ENST00000270142 IGLV4-60A0A075B6I1 120 aa9.77□□□□□ -0.85
SOD1-201ENST00000270142 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
SOD1-201ENST00000270142 CACNG7P62955 275 aa9.77□□□□□ -0.85
SOD1-201ENST00000270142 EIF5AP63241 154 aaKnown RBP9.77□□□□□ -0.85
SOD1-201ENST00000270142 CLRN3Q8NCR9 226 aa9.77□□□□□ -0.85
SOD1-201ENST00000270142 GFRA4Q9GZZ7 299 aa9.77□□□□□ -0.85
SOD1-201ENST00000270142 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
SOD1-201ENST00000270142 RAB19A4D1S5 217 aa9.76□□□□□ -0.85
SOD1-201ENST00000270142 CNBPP62633 177 aaKnown RBP9.76□□□□□ -0.85
SOD1-201ENST00000270142 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
SOD1-201ENST00000270142 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 hDV102S1A0JD36 115 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 P01737 135 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 PLA2G2DQ9UNK4 145 aa9.75□□□□□ -0.85
SOD1-201ENST00000270142 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 SLPIP03973 132 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 RAB5CP51148 216 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
SOD1-201ENST00000270142 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 SMIM12Q96EX1 92 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 PGLYRP4Q96LB8 373 aa9.74□□□□□ -0.85
SOD1-201ENST00000270142 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
SOD1-201ENST00000270142 F2Z2F3 143 aa9.73□□□□□ -0.85
SOD1-201ENST00000270142 TRGC1P0CF51 173 aa9.73□□□□□ -0.85
SOD1-201ENST00000270142 GNG4P50150 75 aa9.73□□□□□ -0.85
SOD1-201ENST00000270142 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
SOD1-201ENST00000270142 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms