RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 Q6ZS46 218 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
NPC1-201ENST00000269228 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
NPC1-201ENST00000269228 ZNF80P51504 273 aaPredicted RBP10.39□□□□□ -0.75
NPC1-201ENST00000269228 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 LINC01006Q8NI28 216 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 FN1P02751 2386 aaKnown RBP10.38□□□□□ -0.75
NPC1-201ENST00000269228 TRBV6-1A0A0K0K1D8 114 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 F8W735 103 aaPredicted RBP10.38□□□□□ -0.75
NPC1-201ENST00000269228 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
NPC1-201ENST00000269228 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
NPC1-201ENST00000269228 PSMG3-AS1Q96PY0 264 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 K7EP13 123 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 CITED1Q99966 193 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 F8WEM9 126 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 CCL25O15444 150 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 COX8AP10176 69 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 CTRLP40313 264 aa10.38□□□□□ -0.75
NPC1-201ENST00000269228 SMR3AQ99954 134 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 SH2D6Q7Z4S9 175 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 PSMB8P28062 276 aa10.37□□□□□ -0.75
NPC1-201ENST00000269228 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
NPC1-201ENST00000269228 CEP350Q5VT06 3117 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
NPC1-201ENST00000269228 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 HILS1P60008 231 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
NPC1-201ENST00000269228 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
NPC1-201ENST00000269228 Q9H8V8 135 aa10.35□□□□□ -0.75
NPC1-201ENST00000269228 NUPR1O60356 82 aa10.35□□□□□ -0.75
NPC1-201ENST00000269228 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
NPC1-201ENST00000269228 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
NPC1-201ENST00000269228 FGF6P10767 208 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 DOPEY1Q5JWR5 2465 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 C9JAW5 83 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
NPC1-201ENST00000269228 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
NPC1-201ENST00000269228 Q6ZTI0 123 aa10.33□□□□□ -0.76
NPC1-201ENST00000269228 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
NPC1-201ENST00000269228 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
NPC1-201ENST00000269228 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
NPC1-201ENST00000269228 IGLL5B9A064 214 aa10.32□□□□□ -0.76
NPC1-201ENST00000269228 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
NPC1-201ENST00000269228 PKD1L2Q7Z442 2459 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 MTORP42345 2549 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 CAMK2N2Q96S95 79 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 COX7A2LO14548 114 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 COA6Q5JTJ3 125 aaKnown RBP10.31□□□□□ -0.76
NPC1-201ENST00000269228 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
NPC1-201ENST00000269228 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
NPC1-201ENST00000269228 C11orf45Q8TAV5 145 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 GDF5OSQ5U4N7 250 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 FAM222AQ5U5X8 452 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 BOD1L2Q8IYS8 172 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 POLQO75417 2590 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
NPC1-201ENST00000269228 K7EP34 96 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 IGLV1-40P01703 118 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 CPAMD8Q8IZJ3 1885 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 PRO1854Q9UHT4 67 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 P0DMU3 169 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 ATG2AQ2TAZ0 1938 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 UBE2BP63146 152 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 COL4A2P08572 1712 aa10.29□□□□□ -0.76
NPC1-201ENST00000269228 KLK5Q9Y337 293 aaPredicted RBP10.28□□□□□ -0.76
NPC1-201ENST00000269228 CEND1Q8N111 149 aa10.28□□□□□ -0.76
NPC1-201ENST00000269228 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
NPC1-201ENST00000269228 FAM110AQ9BQ89 295 aa10.28□□□□□ -0.76
NPC1-201ENST00000269228 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
NPC1-201ENST00000269228 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
NPC1-201ENST00000269228 RAI1Q7Z5J4 1906 aaPredicted RBP10.28□□□□□ -0.76
NPC1-201ENST00000269228 RPL18AQ02543 176 aaKnown RBP10.27□□□□□ -0.76
NPC1-201ENST00000269228 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms