RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CRYGBP07316 175 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 Q6ZQT7 251 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 C20orf203Q8NBC4 194 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 C10orf142B7Z368 130 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 HERVK_113P63121 156 aa11.47□□□□□ -0.57
CASC3-201ENST00000264645 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
CASC3-201ENST00000264645 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 FSTL3O95633 263 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 IGFL3Q6UXB1 125 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 Q9HAA7 133 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 MDFICQ9P1T7 246 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
CASC3-201ENST00000264645 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
CASC3-201ENST00000264645 GRNP28799 593 aaKnown RBP11.45□□□□□ -0.58
CASC3-201ENST00000264645 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
CASC3-201ENST00000264645 UQCRQO14949 82 aa11.44□□□□□ -0.58
CASC3-201ENST00000264645 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
CASC3-201ENST00000264645 UBE2D1P51668 147 aa11.44□□□□□ -0.58
CASC3-201ENST00000264645 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
CASC3-201ENST00000264645 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
CASC3-201ENST00000264645 INSP01308 110 aa11.43□□□□□ -0.58
CASC3-201ENST00000264645 LINC01619G3V211 115 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 CFHR3Q02985 330 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 IGFL2Q6UWQ7 119 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 P0DMU3 169 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 MIAQ16674 131 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
CASC3-201ENST00000264645 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 UCNP55089 124 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 CCDC168Q8NDH2 2452 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 RBM3P98179 157 aaKnown RBP11.41□□□□□ -0.58
CASC3-201ENST00000264645 DAZ2Q13117 558 aaKnown RBP11.41□□□□□ -0.58
CASC3-201ENST00000264645 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
CASC3-201ENST00000264645 CNFNQ9BYD5 112 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
CASC3-201ENST00000264645 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 IGHV1-69P01742 117 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 CCDC140Q96MF4 163 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 CFAP54Q96N23 3096 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 TRBV30A0A0K0K1B3 111 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 hADV29S1A0JD25 119 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 MED14OSP0DP75 135 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 AJUBAQ96IF1 538 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 SND1-IT1Q9HBX3 110 aa11.41□□□□□ -0.58
CASC3-201ENST00000264645 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 UBE2D3P61077 147 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 UBE2D2P62837 147 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 SHISA2Q6UWI4 295 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 TMEM243Q9BU79 118 aa11.4□□□□□ -0.58
CASC3-201ENST00000264645 C3orf22Q8N5N4 141 aa11.4□□□□□ -0.59
CASC3-201ENST00000264645 EXPH5Q8NEV8 1989 aa11.39□□□□□ -0.59
CASC3-201ENST00000264645 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
CASC3-201ENST00000264645 CRLF1O75462 422 aa11.39□□□□□ -0.59
CASC3-201ENST00000264645 A8MZ25 164 aa11.39□□□□□ -0.59
CASC3-201ENST00000264645 C14orf132Q9NPU4 83 aa11.39□□□□□ -0.59
CASC3-201ENST00000264645 BLCAPP62952 87 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 ZFAND2AQ8N6M9 145 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 IGF2RP11717 2491 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 M0QXV9 152 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 LECT2O14960 151 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 PRB1P04280 392 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 HTN3P15516 51 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 PRR9Q5T870 116 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 VSIG2Q96IQ7 327 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 PTPRBP23467 1997 aa11.38□□□□□ -0.59
CASC3-201ENST00000264645 NDUFA7O95182 113 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 C20orf173Q96LM9 149 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 USP9YO00507 2555 aaPredicted RBP11.37□□□□□ -0.59
CASC3-201ENST00000264645 USP9XQ93008 2570 aaPredicted RBP11.37□□□□□ -0.59
CASC3-201ENST00000264645 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 ORMDL1Q9P0S3 153 aa11.37□□□□□ -0.59
CASC3-201ENST00000264645 LAMA3Q16787 3333 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 IGLV4-3A0A075B6K6 122 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 GHRHP01286 108 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
CASC3-201ENST00000264645 MRAPQ8TCY5 172 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 CDKN2A-AS1Q9UH64 79 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 COX7A2LO14548 114 aa11.36□□□□□ -0.59
CASC3-201ENST00000264645 ATP5G1P05496 136 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 LINC00694P0DN24 101 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
CASC3-201ENST00000264645 C5orf38Q86SI9 138 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 U3KQE9 123 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 H7C423 109 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
CASC3-201ENST00000264645 TMEM263Q8WUH6 116 aaKnown RBP11.35□□□□□ -0.59
CASC3-201ENST00000264645 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
CASC3-201ENST00000264645 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
CASC3-201ENST00000264645 PRO0461Q9UI25 63 aa11.34□□□□□ -0.59
CASC3-201ENST00000264645 ADAMTS20P59510 1910 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms