RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 Q8N1Y9 231 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 RPL32P62910 135 aaKnown RBP12.97□□□□□ -0.33
TRAM1-201ENST00000262213 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.33
TRAM1-201ENST00000262213 LY6DQ14210 128 aa12.96□□□□□ -0.33
TRAM1-201ENST00000262213 M0QY20 66 aa12.96□□□□□ -0.34
TRAM1-201ENST00000262213 LGALS9O00182 355 aa12.96□□□□□ -0.34
TRAM1-201ENST00000262213 DCANP1Q8TF63 244 aa12.96□□□□□ -0.34
TRAM1-201ENST00000262213 SLC25A20O43772 301 aa12.95□□□□□ -0.34
TRAM1-201ENST00000262213 P0DMU3 169 aa12.95□□□□□ -0.34
TRAM1-201ENST00000262213 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
TRAM1-201ENST00000262213 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
TRAM1-201ENST00000262213 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
TRAM1-201ENST00000262213 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
TRAM1-201ENST00000262213 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
TRAM1-201ENST00000262213 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
TRAM1-201ENST00000262213 ERG28Q9UKR5 140 aa12.94□□□□□ -0.34
TRAM1-201ENST00000262213 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
TRAM1-201ENST00000262213 SPXQ9BT56 116 aa12.94□□□□□ -0.34
TRAM1-201ENST00000262213 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
TRAM1-201ENST00000262213 LEPROTO15243 131 aa12.93□□□□□ -0.34
TRAM1-201ENST00000262213 ELANEP08246 267 aa12.93□□□□□ -0.34
TRAM1-201ENST00000262213 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
TRAM1-201ENST00000262213 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
TRAM1-201ENST00000262213 VCX2Q9H322 139 aa12.93□□□□□ -0.34
TRAM1-201ENST00000262213 A6NDX4 124 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 RHODO00212 210 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 NPC2P61916 151 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 C9orf85Q96MD7 179 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 DUX5Q96PT3 197 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 PRSS2P07478 247 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 TMEM263Q8WUH6 116 aaKnown RBP12.92□□□□□ -0.34
TRAM1-201ENST00000262213 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
TRAM1-201ENST00000262213 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
TRAM1-201ENST00000262213 H3BUA1 57 aa12.91□□□□□ -0.34
TRAM1-201ENST00000262213 C20orf203Q8NBC4 194 aa12.91□□□□□ -0.34
TRAM1-201ENST00000262213 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
TRAM1-201ENST00000262213 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 TRAV8-3A0A0A6YYJ7 113 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 IGLV1-40P01703 118 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 RNF183Q96D59 192 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 PROK1P58294 105 aa12.9□□□□□ -0.34
TRAM1-201ENST00000262213 A0A0J9YX75 114 aa12.89□□□□□ -0.35
TRAM1-201ENST00000262213 PRM2P04554 102 aa12.89□□□□□ -0.35
TRAM1-201ENST00000262213 RHOHQ15669 191 aa12.89□□□□□ -0.35
TRAM1-201ENST00000262213 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
TRAM1-201ENST00000262213 I3L3M4 83 aa12.89□□□□□ -0.35
TRAM1-201ENST00000262213 PIMREGQ9BSJ6 248 aa12.89□□□□□ -0.35
TRAM1-201ENST00000262213 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
TRAM1-201ENST00000262213 CD28P10747 220 aa12.88□□□□□ -0.35
TRAM1-201ENST00000262213 GATA3P23771 443 aa12.88□□□□□ -0.35
TRAM1-201ENST00000262213 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
TRAM1-201ENST00000262213 A0A0J9YXY3 114 aa12.88□□□□□ -0.35
TRAM1-201ENST00000262213 A8MZ25 164 aa12.88□□□□□ -0.35
TRAM1-201ENST00000262213 IGHV3-30-3P0DP02 117 aa12.87□□□□□ -0.35
TRAM1-201ENST00000262213 CELSR2Q9HCU4 2923 aa12.87□□□□□ -0.35
TRAM1-201ENST00000262213 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
TRAM1-201ENST00000262213 SYNJ2BPP57105 145 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 Q6ZSV7 163 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 ANAPC13Q9BS18 74 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 TIMM21Q9BVV7 248 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 PRORYQ9H606 182 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 K7EMT4 169 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 AVPP01185 164 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 Q9UF83 564 aa12.86□□□□□ -0.35
TRAM1-201ENST00000262213 IGHV4-30-2A0A087WSY4 118 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 A0A0B4J2C4 111 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 TEX49A0A1B0GTD5 131 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 M0R2P5 195 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 LINC01620Q4KN68 170 aa12.85□□□□□ -0.35
TRAM1-201ENST00000262213 TRIAP1O43715 76 aa12.84□□□□□ -0.35
TRAM1-201ENST00000262213 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
TRAM1-201ENST00000262213 GNLYP22749 145 aa12.84□□□□□ -0.35
TRAM1-201ENST00000262213 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
TRAM1-201ENST00000262213 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
TRAM1-201ENST00000262213 TMEM262E9PQX1 116 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 CCL19Q99731 98 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 K7EQG2 157 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 BRI3O95415 125 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 ATP5J2P56134 94 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 CFHR3Q02985 330 aa12.83□□□□□ -0.36
TRAM1-201ENST00000262213 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
TRAM1-201ENST00000262213 CRLF1O75462 422 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 RBMY1A1P0DJD3 496 aaKnown RBP12.81□□□□□ -0.36
TRAM1-201ENST00000262213 RBMY1CP0DJD4 496 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
TRAM1-201ENST00000262213 PSMB8P28062 276 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 NDUFA12Q9UI09 145 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 CACNA1AO00555 2505 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 TRAV4A0A0B4J268 109 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 MSMBP08118 114 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 DAND5Q8N907 189 aa12.81□□□□□ -0.36
TRAM1-201ENST00000262213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-201ENST00000262213 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms