RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PRB1P04280 392 aa16.84■□□□□ 0.29
MCF2L-201ENST00000261963 GAGE2BQ13066 116 aa16.84■□□□□ 0.29
MCF2L-201ENST00000261963 GAGE2EQ4V326 116 aa16.84■□□□□ 0.29
MCF2L-201ENST00000261963 RPL39LQ96EH5 51 aaKnown RBP16.84■□□□□ 0.29
MCF2L-201ENST00000261963 GAGE2DQ9UEU5 116 aa16.84■□□□□ 0.29
MCF2L-201ENST00000261963 PRO1854Q9UHT4 67 aa16.83■□□□□ 0.28
MCF2L-201ENST00000261963 RNF223E7ERA6 249 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 SLC25A20O43772 301 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 IGHV3-30P01768 117 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 IGHV3-30-5P0DP03 117 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 SNCGO76070 127 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 ID1P41134 155 aa16.82■□□□□ 0.28
MCF2L-201ENST00000261963 NXPH4O95158 308 aa16.81■□□□□ 0.28
MCF2L-201ENST00000261963 J3QLI3 93 aa16.81■□□□□ 0.28
MCF2L-201ENST00000261963 M0QXV9 152 aa16.81■□□□□ 0.28
MCF2L-201ENST00000261963 NDUFV3P56181 108 aaKnown RBP16.81■□□□□ 0.28
MCF2L-201ENST00000261963 PAPPA-AS1Q5QFB9 102 aa16.81■□□□□ 0.28
MCF2L-201ENST00000261963 DOPEY2Q9Y3R5 2298 aa16.81■□□□□ 0.28
MCF2L-201ENST00000261963 TMEM89A2RUT3 159 aa16.8■□□□□ 0.28
MCF2L-201ENST00000261963 MUC4Q99102 2169 aa16.8■□□□□ 0.28
MCF2L-201ENST00000261963 C11orf86A6NJI1 115 aa16.8■□□□□ 0.28
MCF2L-201ENST00000261963 MGPP08493 103 aa16.8■□□□□ 0.28
MCF2L-201ENST00000261963 MXRA5Q9NR99 2828 aa16.8■□□□□ 0.28
MCF2L-201ENST00000261963 C9JAW5 83 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 CRYGDP07320 174 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 SLC25A29Q8N8R3 303 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE12JA6NER3 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE7O76087 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE12FP0CL80 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE12GP0CL81 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE12IP0CL82 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 GAGE4Q13068 117 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 KIF25-AS1Q9Y6Z4 181 aa16.79■□□□□ 0.28
MCF2L-201ENST00000261963 LINC00315P59091 139 aa16.78■□□□□ 0.28
MCF2L-201ENST00000261963 CFAP161Q6P656 301 aa16.78■□□□□ 0.28
MCF2L-201ENST00000261963 POM121L12Q8N7R1 296 aa16.78■□□□□ 0.28
MCF2L-201ENST00000261963 IGLV4-69A0A075B6H9 119 aa16.78■□□□□ 0.28
MCF2L-201ENST00000261963 UBR5O95071 2799 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-201ENST00000261963 TTC32Q5I0X7 151 aa16.77■□□□□ 0.28
MCF2L-201ENST00000261963 TRAV4A0A0B4J268 109 aa16.77■□□□□ 0.27
MCF2L-201ENST00000261963 DUSP14O95147 198 aaKnown RBP16.77■□□□□ 0.27
MCF2L-201ENST00000261963 FSHBP01225 129 aa16.77■□□□□ 0.27
MCF2L-201ENST00000261963 BBC3Q96PG8 261 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-201ENST00000261963 EMP1P54849 157 aa16.76■□□□□ 0.27
MCF2L-201ENST00000261963 VPREB3Q9UKI3 123 aa16.76■□□□□ 0.27
MCF2L-201ENST00000261963 IFITM1P13164 125 aa16.76■□□□□ 0.27
MCF2L-201ENST00000261963 FAM159AQ6UWV7 190 aa16.76■□□□□ 0.27
MCF2L-201ENST00000261963 RAX2Q96IS3 184 aa16.76■□□□□ 0.27
MCF2L-201ENST00000261963 TRAV12-3A0A0B4J271 114 aa16.75■□□□□ 0.27
MCF2L-201ENST00000261963 TRPT1Q86TN4 253 aaKnown RBP16.75■□□□□ 0.27
MCF2L-201ENST00000261963 ABCA12Q86UK0 2595 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 NAV2Q8IVL1 2488 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 PPP1R17O96001 155 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 SYNJ2BPP57105 145 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 TSPEAR-AS2P59090 65 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 JPT2Q9H910 190 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 ZNF702PQ9H963 129 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 CREBBPQ92793 2442 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 CCDC179H3BU77 68 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 CRLF1O75462 422 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 PMVKQ15126 192 aa16.74■□□□□ 0.27
MCF2L-201ENST00000261963 A0A0J9YX75 114 aa16.73■□□□□ 0.27
MCF2L-201ENST00000261963 K7EQG2 157 aa16.73■□□□□ 0.27
MCF2L-201ENST00000261963 TSHBP01222 138 aa16.73■□□□□ 0.27
MCF2L-201ENST00000261963 Q6YL49 198 aa16.73■□□□□ 0.27
MCF2L-201ENST00000261963 IGHV4OR15-8A0A075B7B6 117 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 A0A087WW49 117 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 IGHV4-31P0DP07 118 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 Q6Q795 121 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 ODF3Q96PU9 254 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 KRTAP10-9P60411 292 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 TMEM170BQ5T4T1 132 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 FAM110AQ9BQ89 295 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
MCF2L-201ENST00000261963 Q8N1Y9 231 aa16.71■□□□□ 0.27
MCF2L-201ENST00000261963 NTN5Q8WTR8 489 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-201ENST00000261963 IGKV3-20P01619 116 aa16.71■□□□□ 0.27
MCF2L-201ENST00000261963 IGHV3-33P01772 117 aa16.71■□□□□ 0.27
MCF2L-201ENST00000261963 TRAV12-2A0A075B6T6 113 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 A4D1N5 150 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 ELANEP08246 267 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 SNRPD3P62318 126 aaKnown RBP16.7■□□□□ 0.26
MCF2L-201ENST00000261963 DUX5Q96PT3 197 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 IGIPA6NJ69 53 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 P0DMU3 169 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 FAM231AP0DMU4 169 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 FAM231CP0DMU5 169 aa16.7■□□□□ 0.26
MCF2L-201ENST00000261963 LGALS9O00182 355 aa16.69■□□□□ 0.26
MCF2L-201ENST00000261963 LGALS3P17931 250 aaKnown RBP16.69■□□□□ 0.26
MCF2L-201ENST00000261963 BEX4Q9NWD9 120 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-201ENST00000261963 IGHV3-16A0A0C4DH30 117 aa16.69■□□□□ 0.26
MCF2L-201ENST00000261963 J3QQQ9 107 aa16.69■□□□□ 0.26
MCF2L-201ENST00000261963 HOXD3P31249 432 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-201ENST00000261963 SUMO4Q6EEV6 95 aa16.69■□□□□ 0.26
MCF2L-201ENST00000261963 TMEM263Q8WUH6 116 aaKnown RBP16.69■□□□□ 0.26
MCF2L-201ENST00000261963 AMELXQ99217 191 aa16.69■□□□□ 0.26
MCF2L-201ENST00000261963 A0A087WWL8 130 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 TMEM141Q96I45 108 aa16.68■□□□□ 0.26
MCF2L-201ENST00000261963 SORL1Q92673 2214 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms