RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 INSL3P51460 131 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
TM9SF1-201ENST00000261789 PTPN13Q12923 2485 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 KNCNA6PVL3 124 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 HERVK_113P61574 105 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 SAMD13Q5VXD3 122 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
TM9SF1-201ENST00000261789 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 PROK1P58294 105 aa12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 BEX4Q9NWD9 120 aaPredicted RBP12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 AKAP9Q99996 3911 aa12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 UBE2D1P51668 147 aa12.06□□□□□ -0.48
TM9SF1-201ENST00000261789 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 TSPAN13O95857 204 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 GATA3P23771 443 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 ZNF462Q96JM2 2506 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 PAPPA-AS1Q5QFB9 102 aa12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
TM9SF1-201ENST00000261789 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 A6NJY4 79 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 Q9UF83 564 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 TSSC4Q9Y5U2 329 aaPredicted RBP12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 A0A096LNT2 108 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 SLURP1P55000 103 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 TCTEX1D4Q5JR98 221 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 AMELXQ99217 191 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 GTSF1LQ9H1H1 148 aa12.04□□□□□ -0.48
TM9SF1-201ENST00000261789 J3QQQ9 107 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 PSMB2P49721 201 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 ZNF702PQ9H963 129 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 NF1P21359 2839 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 CHD6Q8TD26 2715 aa12.03□□□□□ -0.48
TM9SF1-201ENST00000261789 IGHV3-30P01768 117 aa12.02□□□□□ -0.48
TM9SF1-201ENST00000261789 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.48
TM9SF1-201ENST00000261789 NSUN5P1Q3KNT7 163 aa12.02□□□□□ -0.48
TM9SF1-201ENST00000261789 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.48
TM9SF1-201ENST00000261789 CFC1BP0CG36 223 aa12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 CFC1P0CG37 223 aa12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 DEFB131AP59861 70 aa12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 C20orf203Q8NBC4 194 aa12.02□□□□□ -0.49
TM9SF1-201ENST00000261789 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 SLC25A29Q8N8R3 303 aa12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 I3L3M4 83 aa12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 DSCR9P59020 149 aa12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-201ENST00000261789 NBPF19A0A087WUL8 3843 aa12□□□□□ -0.49
TM9SF1-201ENST00000261789 NAV2Q8IVL1 2488 aa12□□□□□ -0.49
TM9SF1-201ENST00000261789 ZNF418Q8TF45 676 aaPredicted RBP12□□□□□ -0.49
TM9SF1-201ENST00000261789 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
TM9SF1-201ENST00000261789 TMEM89A2RUT3 159 aa12□□□□□ -0.49
TM9SF1-201ENST00000261789 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
TM9SF1-201ENST00000261789 RHOHQ15669 191 aa12□□□□□ -0.49
TM9SF1-201ENST00000261789 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 TMEM223A0PJW6 202 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 GAGE12HA6NDE8 117 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 AZU1P20160 251 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 DLX4Q92988 240 aaPredicted RBP11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 PTH2Q96A98 100 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 UBE2E2Q96LR5 201 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 RBMY1BA6NDE4 496 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 RBMY1EA6NEQ0 496 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 ELANEP08246 267 aa11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 RBMY1DP0C7P1 496 aaKnown RBP11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
TM9SF1-201ENST00000261789 ADARB2-AS1A8MUL3 147 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 Q6YL49 198 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 VCX2Q9H322 139 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 TRGV11A0A075B6L2 103 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 Q6ZSN1 163 aa11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 SONP18583 2426 aaKnown RBP11.98□□□□□ -0.49
TM9SF1-201ENST00000261789 RHODO00212 210 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 UBE2D3P61077 147 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 UBE2D2P62837 147 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 FAM104AQ969W3 186 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 SPXQ9BT56 116 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
TM9SF1-201ENST00000261789 TRAV2A0A0B4J234 112 aa11.96□□□□□ -0.49
TM9SF1-201ENST00000261789 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
TM9SF1-201ENST00000261789 TCL1BO95988 128 aa11.96□□□□□ -0.49
TM9SF1-201ENST00000261789 CR1P17927 2039 aa11.96□□□□□ -0.5
TM9SF1-201ENST00000261789 A4D1N5 150 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms