RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
PAX3-201ENST00000258387 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
PAX3-201ENST00000258387 MBD3L1Q8WWY6 194 aa12.12□□□□□ -0.47
PAX3-201ENST00000258387 MLST8Q9BVC4 326 aa12.12□□□□□ -0.47
PAX3-201ENST00000258387 SSBP4Q9BWG4 385 aaPredicted RBP12.12□□□□□ -0.47
PAX3-201ENST00000258387 FAT3Q8TDW7 4589 aa12.12□□□□□ -0.47
PAX3-201ENST00000258387 SNAI2O43623 268 aa12.11□□□□□ -0.47
PAX3-201ENST00000258387 PRSS1P07477 247 aa12.11□□□□□ -0.47
PAX3-201ENST00000258387 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
PAX3-201ENST00000258387 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
PAX3-201ENST00000258387 CXCL1P09341 107 aa12.1□□□□□ -0.47
PAX3-201ENST00000258387 PKIAP61925 76 aa12.1□□□□□ -0.47
PAX3-201ENST00000258387 MIAQ16674 131 aa12.1□□□□□ -0.47
PAX3-201ENST00000258387 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
PAX3-201ENST00000258387 LINC00269Q8N2A0 174 aa12.1□□□□□ -0.47
PAX3-201ENST00000258387 OXTP01178 125 aa12.09□□□□□ -0.47
PAX3-201ENST00000258387 OR5AL1P0C617 328 aa12.09□□□□□ -0.47
PAX3-201ENST00000258387 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
PAX3-201ENST00000258387 RBX1P62877 108 aa12.09□□□□□ -0.47
PAX3-201ENST00000258387 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
PAX3-201ENST00000258387 KCNRGQ8N5I3 272 aa12.09□□□□□ -0.47
PAX3-201ENST00000258387 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
PAX3-201ENST00000258387 TMEM97Q5BJF2 176 aa12.08□□□□□ -0.48
PAX3-201ENST00000258387 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
PAX3-201ENST00000258387 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
PAX3-201ENST00000258387 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
PAX3-201ENST00000258387 PKHD1L1Q86WI1 4243 aa12.07□□□□□ -0.48
PAX3-201ENST00000258387 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
PAX3-201ENST00000258387 RGS21Q2M5E4 152 aa12.07□□□□□ -0.48
PAX3-201ENST00000258387 DGAT2L7PQ6IED9 249 aa12.07□□□□□ -0.48
PAX3-201ENST00000258387 VAX2Q9UIW0 290 aa12.07□□□□□ -0.48
PAX3-201ENST00000258387 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
PAX3-201ENST00000258387 MGPP08493 103 aa12.06□□□□□ -0.48
PAX3-201ENST00000258387 GZMBP10144 247 aa12.06□□□□□ -0.48
PAX3-201ENST00000258387 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
PAX3-201ENST00000258387 AP1S3Q96PC3 154 aa12.06□□□□□ -0.48
PAX3-201ENST00000258387 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
PAX3-201ENST00000258387 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
PAX3-201ENST00000258387 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
PAX3-201ENST00000258387 IGLV10-54A0A075B6I4 117 aa12.04□□□□□ -0.48
PAX3-201ENST00000258387 IGHV1-24A0A0C4DH33 117 aa12.04□□□□□ -0.48
PAX3-201ENST00000258387 ZNF345Q14585 488 aa12.04□□□□□ -0.48
PAX3-201ENST00000258387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.04□□□□□ -0.48
PAX3-201ENST00000258387 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
PAX3-201ENST00000258387 M0QY20 66 aa12.03□□□□□ -0.48
PAX3-201ENST00000258387 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
PAX3-201ENST00000258387 CCL20P78556 96 aa12.03□□□□□ -0.48
PAX3-201ENST00000258387 DAZAP1Q96EP5 407 aaKnown RBP12.03□□□□□ -0.48
PAX3-201ENST00000258387 GNG13Q9P2W3 67 aa12.03□□□□□ -0.48
PAX3-201ENST00000258387 A0A0D9SG52 128 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 PANO1I0J062 215 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 RAB5CP51148 216 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 REG3AQ06141 175 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 OR2D3Q8NGH3 330 aa12.02□□□□□ -0.49
PAX3-201ENST00000258387 BCL2L11O43521 198 aa12.01□□□□□ -0.49
PAX3-201ENST00000258387 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
PAX3-201ENST00000258387 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
PAX3-201ENST00000258387 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
PAX3-201ENST00000258387 hDV102S1A0JD36 115 aa12□□□□□ -0.49
PAX3-201ENST00000258387 HMSDA8MTL9 139 aa12□□□□□ -0.49
PAX3-201ENST00000258387 H7C1H1 209 aa12□□□□□ -0.49
PAX3-201ENST00000258387 CLRN3Q8NCR9 226 aa12□□□□□ -0.49
PAX3-201ENST00000258387 DPH3Q96FX2 82 aa12□□□□□ -0.49
PAX3-201ENST00000258387 UBR4Q5T4S7 5183 aa12□□□□□ -0.49
PAX3-201ENST00000258387 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
PAX3-201ENST00000258387 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
PAX3-201ENST00000258387 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
PAX3-201ENST00000258387 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
PAX3-201ENST00000258387 PLA2G2DQ9UNK4 145 aa11.99□□□□□ -0.49
PAX3-201ENST00000258387 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
PAX3-201ENST00000258387 CACNG7P62955 275 aa11.98□□□□□ -0.49
PAX3-201ENST00000258387 EIF5AP63241 154 aaKnown RBP11.98□□□□□ -0.49
PAX3-201ENST00000258387 C11orf52Q96A22 123 aa11.98□□□□□ -0.49
PAX3-201ENST00000258387 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
PAX3-201ENST00000258387 MANBALQ9NQG1 85 aa11.98□□□□□ -0.49
PAX3-201ENST00000258387 RASL11AQ6T310 242 aa11.97□□□□□ -0.49
PAX3-201ENST00000258387 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
PAX3-201ENST00000258387 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.49
PAX3-201ENST00000258387 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
PAX3-201ENST00000258387 P01737 135 aa11.96□□□□□ -0.49
PAX3-201ENST00000258387 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
PAX3-201ENST00000258387 IFNA1P01562 189 aa11.95□□□□□ -0.5
PAX3-201ENST00000258387 GNG4P50150 75 aa11.95□□□□□ -0.5
PAX3-201ENST00000258387 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
PAX3-201ENST00000258387 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
PAX3-201ENST00000258387 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
PAX3-201ENST00000258387 IGHV3-64A0A075B6Q5 118 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 XKRY2A2RUG3 117 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 F2Z2F3 143 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 UBE2L6O14933 153 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 SLPIP03973 132 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 NTF3P20783 257 aa11.94□□□□□ -0.5
PAX3-201ENST00000258387 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
PAX3-201ENST00000258387 TRGC1P0CF51 173 aa11.93□□□□□ -0.5
PAX3-201ENST00000258387 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
PAX3-201ENST00000258387 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms