RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
MSI1-201ENST00000257552 GAGE12JA6NER3 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 GAGE7O76087 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 GAGE4Q13068 117 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 TMEM263Q8WUH6 116 aaKnown RBP11.05□□□□□ -0.64
MSI1-201ENST00000257552 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
MSI1-201ENST00000257552 PPP1R17O96001 155 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 LINC00315P59091 139 aa11.05□□□□□ -0.64
MSI1-201ENST00000257552 IGHV1-69DA0A0B4J2H0 117 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 IFITM1P13164 125 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 U3KQE9 123 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 NAV2Q8IVL1 2488 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 VCYO14598 125 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
MSI1-201ENST00000257552 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 C15orf53Q8NAA6 179 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
MSI1-201ENST00000257552 DOPEY2Q9Y3R5 2298 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 PRSS2P07478 247 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 SMIM20Q8N5G0 67 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 IGHV4-61A0A0C4DH41 118 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
MSI1-201ENST00000257552 ATXN8Q156A1 80 aa11.02□□□□□ -0.64
MSI1-201ENST00000257552 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.64
MSI1-201ENST00000257552 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.64
MSI1-201ENST00000257552 CCL19Q99731 98 aa11.02□□□□□ -0.64
MSI1-201ENST00000257552 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.64
MSI1-201ENST00000257552 OVOL1O14753 267 aa11.02□□□□□ -0.65
MSI1-201ENST00000257552 ODF3Q96PU9 254 aa11.02□□□□□ -0.65
MSI1-201ENST00000257552 MUC4Q99102 2169 aa11.02□□□□□ -0.65
MSI1-201ENST00000257552 OOSP1A8MZH6 123 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 TIMM17AQ99595 171 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 NPC2P61916 151 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 A0A0J9YXV3 536 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 UBE2E1P51965 193 aa11.01□□□□□ -0.65
MSI1-201ENST00000257552 IGHV4OR15-8A0A075B7B6 117 aa11□□□□□ -0.65
MSI1-201ENST00000257552 A0A087WW49 117 aa11□□□□□ -0.65
MSI1-201ENST00000257552 TRIAP1O43715 76 aa11□□□□□ -0.65
MSI1-201ENST00000257552 ATP5J2P56134 94 aa11□□□□□ -0.65
MSI1-201ENST00000257552 HERV-K104P63124 156 aa11□□□□□ -0.65
MSI1-201ENST00000257552 C3orf56Q8N813 242 aa11□□□□□ -0.65
MSI1-201ENST00000257552 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
MSI1-201ENST00000257552 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 Q6ZSV7 163 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 SPXQ9BT56 116 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 TRAV12-3A0A0B4J271 114 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 NPFFO15130 113 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 LEPROTO15243 131 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 ZNF56Q15929 161 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 LY6EQ16553 131 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 NBPF19A0A087WUL8 3843 aa10.99□□□□□ -0.65
MSI1-201ENST00000257552 CREBBPQ92793 2442 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 IGHV4-30-2A0A087WSY4 118 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 A0A0B4J2C4 111 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 H3BMM0 161 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 P0DMU3 169 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 FAM231AP0DMU4 169 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 FAM231CP0DMU5 169 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 MAPK1IP1LQ8NDC0 245 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 MXRA5Q9NR99 2828 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 ZNF22P17026 224 aaPredicted RBP10.98□□□□□ -0.65
MSI1-201ENST00000257552 SOCS3O14543 225 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 IGKV3-20P01619 116 aa10.98□□□□□ -0.65
MSI1-201ENST00000257552 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
MSI1-201ENST00000257552 IGHV4-38-2P0DP08 117 aa10.97□□□□□ -0.65
MSI1-201ENST00000257552 MED14OSP0DP75 135 aa10.97□□□□□ -0.65
MSI1-201ENST00000257552 DUX3Q96PT4 197 aa10.97□□□□□ -0.65
MSI1-201ENST00000257552 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
MSI1-201ENST00000257552 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
MSI1-201ENST00000257552 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
MSI1-201ENST00000257552 RPL32P62910 135 aaKnown RBP10.97□□□□□ -0.65
MSI1-201ENST00000257552 A0A0J9YXY3 114 aa10.96□□□□□ -0.65
MSI1-201ENST00000257552 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
MSI1-201ENST00000257552 CLEC2BQ92478 149 aa10.96□□□□□ -0.65
MSI1-201ENST00000257552 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.65
MSI1-201ENST00000257552 TRBV27A0A0K0K1C4 114 aa10.96□□□□□ -0.66
MSI1-201ENST00000257552 MYO9AB2RTY4 2548 aa10.96□□□□□ -0.66
MSI1-201ENST00000257552 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
MSI1-201ENST00000257552 TEX15Q9BXT5 2789 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 ZNF469Q96JG9 3925 aaPredicted RBP10.95□□□□□ -0.66
MSI1-201ENST00000257552 EDN2P20800 178 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 PIMREGQ9BSJ6 248 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 TRAV12-2A0A075B6T6 113 aa10.95□□□□□ -0.66
MSI1-201ENST00000257552 M0QXV9 152 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms