RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 HIGD2BQ4VC39 106 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 Q6ZS46 218 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 DCTN5Q9BTE1 182 aa5.08□□□□□ -1.6
PDGFRA-201ENST00000257290 DEFB112Q30KQ8 113 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 CYP4F30PQ9H0H9 118 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 UBE2D4Q9Y2X8 147 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 MYO7BQ6PIF6 2116 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 A0A0J9YX75 114 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 TRBV10-1A0A0K0K1A3 114 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 DKK1O94907 266 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 LINC00846Q9NV44 126 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 ZNF295-AS1Q8N0V1 137 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 LINC00322Q6ZN03 302 aaPredicted RBP5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 Q6ZRU5 148 aa5.07□□□□□ -1.6
PDGFRA-201ENST00000257290 PTPRSQ13332 1948 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV1-46P01743 117 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 SDK1Q7Z5N4 2213 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV3OR16-13A0A075B7E8 117 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV3-74A0A0B4J1X5 117 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 BUB1B-PAK6H3BSN5 160 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 Q8N3U1 123 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 PI4KAP42356 2102 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 COL4A3Q01955 1670 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 FANCMQ8IYD8 2048 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 LINC01548A6NM66 108 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 C10orf142B7Z368 130 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 H3BRN7 92 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 ZNF80P51504 273 aaPredicted RBP5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 ZNF524Q96C55 264 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 RPL39LQ96EH5 51 aaKnown RBP5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 ZFAND3Q9H8U3 227 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV3-66A0A0C4DH42 116 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 M0R378 163 aa5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 WT1P19544 449 aaPredicted RBP5.06□□□□□ -1.6
PDGFRA-201ENST00000257290 DOCK7Q96N67 2140 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV3-35A0A0C4DH35 117 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 K7ERS5 55 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 SRRM5B3KS81 715 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 IGFL2Q6UWQ7 119 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 LINC00308Q8TCZ7 52 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 C10orf55Q5SWW7 151 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 NCKAP5O14513 1909 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 S4R3C0 116 aa5.05□□□□□ -1.6
PDGFRA-201ENST00000257290 FREM3P0C091 2139 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 LINC00205P59089 165 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 NDUFA4L2Q9NRX3 87 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 K7EMT4 169 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 A8MUN3 132 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 RPL39P62891 51 aaKnown RBP5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 A0A096LNJ9 63 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 TRGV3P03979 118 aa5.04□□□□□ -1.6
PDGFRA-201ENST00000257290 H7BZZ5 65 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 MIR7-3HGQ8N6C7 128 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 IGHV3-49A0A0A0MS15 119 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 RPL28P46779 137 aaKnown RBP5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 PATE2Q6UY27 113 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 DPM3Q9P2X0 92 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 EXPH5Q8NEV8 1989 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 MDC1Q14676 2089 aaKnown RBP5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 LY6LH3BQJ8 138 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
PDGFRA-201ENST00000257290 IGLV3-1P01715 115 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 IGHV3-23P01764 117 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 PLA2G5P39877 138 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 C9orf116Q5BN46 136 aaPredicted RBP5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 UNC13CQ8NB66 2214 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 RP1P56715 2156 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 PSPNO60542 156 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 DSCR9P59020 149 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 PIP4P2Q8N4L2 257 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 IGHV3OR16-8A0A075B7F1 116 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 SLPIP03973 132 aa5.02□□□□□ -1.61
PDGFRA-201ENST00000257290 KRTAP27-1Q3LI81 207 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 IGLV1-44P01699 117 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 EP400Q96L91 3159 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 TRBV6-8A0A0A6YYG3 113 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 IGKV3-20P01619 116 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 ALPK3Q96L96 1907 aa5.01□□□□□ -1.61
PDGFRA-201ENST00000257290 VMO1Q7Z5L0 202 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 SMCR5Q8TEV8 140 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 TMEM131Q92545 1883 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 B9D2Q9BPU9 175 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 NACAE9PAV3 2078 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 IGHV4-28A0A0C4DH34 117 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 A0A1W2PNU3 283 aaPredicted RBP5□□□□□ -1.61
PDGFRA-201ENST00000257290 hDV103S1A0JD37 113 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 NDUFA1O15239 70 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 CCL3L1P16619 93 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 LENEPQ9Y5L5 61 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 FAM215AQ9Y5M1 114 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 PHF3Q92576 2039 aaKnown RBP5□□□□□ -1.61
PDGFRA-201ENST00000257290 IGHV7-4-1A0A0J9YVY3 117 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms