RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 C20orf144Q9BQM9 153 aa8.49□□□□□ -1.05
LIN28A-201ENST00000254231 A0A1B0GXF2 115 aa8.49□□□□□ -1.05
LIN28A-201ENST00000254231 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
LIN28A-201ENST00000254231 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
LIN28A-201ENST00000254231 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
LIN28A-201ENST00000254231 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
LIN28A-201ENST00000254231 KLLNB2CW77 178 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 IGHV4-30-4P0DP06 118 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 TMEM160Q9NX00 188 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 SLC25A34Q6PIV7 304 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 ATP5L2Q7Z4Y8 100 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
LIN28A-201ENST00000254231 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 IGHV1-24A0A0C4DH33 117 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 CACNG7P62955 275 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 CT83Q5H943 113 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 DNLZQ5SXM8 178 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 Q6AWC8 147 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
LIN28A-201ENST00000254231 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
LIN28A-201ENST00000254231 Q0VG73 95 aa8.47□□□□□ -1.05
LIN28A-201ENST00000254231 Q6ZSN1 163 aa8.47□□□□□ -1.05
LIN28A-201ENST00000254231 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
LIN28A-201ENST00000254231 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 AMMECR1LQ6DCA0 310 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 ZNF575Q86XF7 245 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.05
LIN28A-201ENST00000254231 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.05
LIN28A-201ENST00000254231 COX19Q49B96 90 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 CITED1Q99966 193 aa8.46□□□□□ -1.05
LIN28A-201ENST00000254231 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
LIN28A-201ENST00000254231 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
LIN28A-201ENST00000254231 CCL25O15444 150 aa8.45□□□□□ -1.06
LIN28A-201ENST00000254231 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
LIN28A-201ENST00000254231 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
LIN28A-201ENST00000254231 SAMD13Q5VXD3 122 aa8.45□□□□□ -1.06
LIN28A-201ENST00000254231 K7EMI3 77 aa8.45□□□□□ -1.06
LIN28A-201ENST00000254231 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
LIN28A-201ENST00000254231 CTRLP40313 264 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 TRPT1Q86TN4 253 aaKnown RBP8.44□□□□□ -1.06
LIN28A-201ENST00000254231 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 KIR2DL4Q99706 377 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 TRAV9-1A0A075B6T8 112 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
LIN28A-201ENST00000254231 RASL10AQ92737 203 aa8.43□□□□□ -1.06
LIN28A-201ENST00000254231 LENEPQ9Y5L5 61 aa8.43□□□□□ -1.06
LIN28A-201ENST00000254231 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
LIN28A-201ENST00000254231 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
LIN28A-201ENST00000254231 IGLV10-54A0A075B6I4 117 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 GCSHP23434 173 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 KRTAP10-11P60412 298 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 TRAV8-6A0A0B4J262 113 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 M0R2P5 195 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
LIN28A-201ENST00000254231 HSPB8Q9UJY1 196 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 TP53TG1Q9Y2A0 90 aa8.42□□□□□ -1.06
LIN28A-201ENST00000254231 H3BUT2 72 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 DAD1P61803 113 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 NPC2P61916 151 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 GAGE6Q13070 117 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 C1QTNF4Q9BXJ3 329 aa8.41□□□□□ -1.06
LIN28A-201ENST00000254231 TRAV25A0A0B4J276 109 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 CRYGDP07320 174 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 IFI27L1Q96BM0 104 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 HBDP02042 147 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 COTL1Q14019 142 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
LIN28A-201ENST00000254231 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
LIN28A-201ENST00000254231 UBE2V1Q13404 147 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 LAGE3Q14657 143 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 Q8N976 141 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
LIN28A-201ENST00000254231 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
LIN28A-201ENST00000254231 SLC25A29Q8N8R3 303 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 ZNF493Q6ZR52 646 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 MTURNQ8N3F0 131 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
LIN28A-201ENST00000254231 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms