RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MGPP08493 103 aa15.33■□□□□ 0.04
LSM4-201ENST00000252816 FAM210AQ96ND0 272 aa15.33■□□□□ 0.04
LSM4-201ENST00000252816 EIF5A2Q9GZV4 153 aaKnown RBP15.33■□□□□ 0.04
LSM4-201ENST00000252816 PSCAO43653 123 aa15.32■□□□□ 0.04
LSM4-201ENST00000252816 NTF3P20783 257 aa15.32■□□□□ 0.04
LSM4-201ENST00000252816 M0QY20 66 aa15.31■□□□□ 0.04
LSM4-201ENST00000252816 SUMO4Q6EEV6 95 aa15.31■□□□□ 0.04
LSM4-201ENST00000252816 TRBV6-8A0A0A6YYG3 113 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 NDUFS6O75380 124 aaKnown RBP15.3■□□□□ 0.04
LSM4-201ENST00000252816 WDR73Q6P4I2 378 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 GTSF1Q8WW33 167 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 CNFNQ9BYD5 112 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 KRTAP17-1Q9BYP8 105 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 URGCP-MRPS24S4R325 110 aa15.3■□□□□ 0.04
LSM4-201ENST00000252816 SRP19P09132 144 aaKnown RBP15.29■□□□□ 0.04
LSM4-201ENST00000252816 TRGC1P0CF51 173 aa15.29■□□□□ 0.04
LSM4-201ENST00000252816 CDPF1Q6NVV7 123 aa15.29■□□□□ 0.04
LSM4-201ENST00000252816 DNAJC30Q96LL9 226 aa15.29■□□□□ 0.04
LSM4-201ENST00000252816 TRAV8-3A0A0A6YYJ7 113 aa15.28■□□□□ 0.04
LSM4-201ENST00000252816 NTM-AS1Q6ZSK4 140 aa15.28■□□□□ 0.04
LSM4-201ENST00000252816 FAM231DQ6ZW35 169 aa15.28■□□□□ 0.04
LSM4-201ENST00000252816 SMIM7Q9BQ49 75 aa15.28■□□□□ 0.04
LSM4-201ENST00000252816 A0A087WX48 190 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 GATCO43716 136 aaKnown RBP15.27■□□□□ 0.04
LSM4-201ENST00000252816 TWIST1Q15672 202 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 CHCHD7Q9BUK0 85 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 TM2D2Q9BX73 214 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 DPH3P1Q9H4G8 78 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 KLK12Q9UKR0 248 aa15.27■□□□□ 0.04
LSM4-201ENST00000252816 LINC01551Q86U37 167 aa15.26■□□□□ 0.03
LSM4-201ENST00000252816 ZNF727A8MUV8 499 aa15.25■□□□□ 0.03
LSM4-201ENST00000252816 TMEM262E9PQX1 116 aa15.25■□□□□ 0.03
LSM4-201ENST00000252816 H7C1H1 209 aa15.25■□□□□ 0.03
LSM4-201ENST00000252816 TEX261Q6UWH6 196 aa15.25■□□□□ 0.03
LSM4-201ENST00000252816 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.25■□□□□ 0.03
LSM4-201ENST00000252816 WFDC2Q14508 124 aa15.24■□□□□ 0.03
LSM4-201ENST00000252816 MAPKAPK5-AS1Q8N8E1 139 aa15.24■□□□□ 0.03
LSM4-201ENST00000252816 KRTAP4-5Q9BYR2 181 aa15.24■□□□□ 0.03
LSM4-201ENST00000252816 KRTAP10-1P60331 282 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 MPV17L2Q567V2 206 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 KCNIP4Q6PIL6 250 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 RASL11AQ6T310 242 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 Q8N814 137 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 UBE2WQ96B02 151 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 CHCHD5Q9BSY4 110 aa15.23■□□□□ 0.03
LSM4-201ENST00000252816 A8MWL6 223 aa15.22■□□□□ 0.03
LSM4-201ENST00000252816 C9JQL5 133 aa15.22■□□□□ 0.03
LSM4-201ENST00000252816 TMEM97Q5BJF2 176 aa15.22■□□□□ 0.03
LSM4-201ENST00000252816 CT83Q5H943 113 aa15.22■□□□□ 0.03
LSM4-201ENST00000252816 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.03
LSM4-201ENST00000252816 ELOBQ15370 118 aa15.21■□□□□ 0.03
LSM4-201ENST00000252816 PGLYRP4Q96LB8 373 aa15.21■□□□□ 0.03
LSM4-201ENST00000252816 NIT2Q9NQR4 276 aa15.2■□□□□ 0.02
LSM4-201ENST00000252816 IGKV2D-24A0A075B6R9 120 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 LECT2O14960 151 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 SRSF3P84103 164 aaKnown RBP15.19■□□□□ 0.02
LSM4-201ENST00000252816 IQCJQ1A5X6 159 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 ATRAIDQ6UW56 229 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 C15orf54Q8N8G6 183 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 Q8N976 141 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 GATD1Q8NB37 220 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 OSTCQ9NRP0 149 aa15.19■□□□□ 0.02
LSM4-201ENST00000252816 PCLOQ9Y6V0 5065 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 TRBV25-1A0A075B6N4 114 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 IGLV5-52A0A0A0MRZ9 124 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 TRAV26-2A0A0B4J265 109 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 GCSHP23434 173 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 GAGE6Q13070 117 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 ENHOQ6UWT2 76 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 NTN5Q8WTR8 489 aaPredicted RBP15.18■□□□□ 0.02
LSM4-201ENST00000252816 RMI2Q96E14 147 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 COX11Q9Y6N1 276 aa15.18■□□□□ 0.02
LSM4-201ENST00000252816 TSKUQ8WUA8 353 aa15.17■□□□□ 0.02
LSM4-201ENST00000252816 BAALCQ8WXS3 180 aa15.17■□□□□ 0.02
LSM4-201ENST00000252816 IGHV1-24A0A0C4DH33 117 aa15.16■□□□□ 0.02
LSM4-201ENST00000252816 ANGP03950 147 aaKnown RBP15.16■□□□□ 0.02
LSM4-201ENST00000252816 PKIAP61925 76 aa15.16■□□□□ 0.02
LSM4-201ENST00000252816 RBX1P62877 108 aa15.16■□□□□ 0.02
LSM4-201ENST00000252816 DEFB104AQ8WTQ1 72 aa15.16■□□□□ 0.02
LSM4-201ENST00000252816 HIGD1CA8MV81 97 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 XGP55808 180 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 Q0VG73 95 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 TMEM241Q24JQ0 296 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 FAM74A3Q4VXF1 159 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 SMIM15Q7Z3B0 74 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 ISOC2Q96AB3 205 aa15.15■□□□□ 0.02
LSM4-201ENST00000252816 RPL23P62829 140 aaKnown RBP15.14■□□□□ 0.01
LSM4-201ENST00000252816 PEA15Q15121 130 aa15.14■□□□□ 0.01
LSM4-201ENST00000252816 FRZBQ92765 325 aa15.14■□□□□ 0.01
LSM4-201ENST00000252816 GFRA4Q9GZZ7 299 aa15.14■□□□□ 0.01
LSM4-201ENST00000252816 V9GYV3 84 aa15.14■□□□□ 0.01
LSM4-201ENST00000252816 Q8N1X5 172 aa15.13■□□□□ 0.01
LSM4-201ENST00000252816 RPL39LQ96EH5 51 aaKnown RBP15.13■□□□□ 0.01
LSM4-201ENST00000252816 FAM231BA6NCW3 169 aa15.12■□□□□ 0.01
LSM4-201ENST00000252816 CRPP02741 224 aa15.12■□□□□ 0.01
LSM4-201ENST00000252816 TMEM243Q9BU79 118 aa15.12■□□□□ 0.01
LSM4-201ENST00000252816 ABCA13Q86UQ4 5058 aa15.11■□□□□ 0.01
LSM4-201ENST00000252816 A0A1B0GUT8 65 aa15.11■□□□□ 0.01
LSM4-201ENST00000252816 ADIRFQ15847 76 aa15.11■□□□□ 0.01
LSM4-201ENST00000252816 BORCS7Q96B45 105 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms