RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 NTN5Q8WTR8 489 aaPredicted RBP12□□□□□ -0.49
SIN3B-201ENST00000248054 TOMM6Q96B49 74 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 C16orf74Q96GX8 76 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 SPG11Q96JI7 2443 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
SIN3B-201ENST00000248054 ATP6V0E2Q8NHE4 81 aa11.99□□□□□ -0.49
SIN3B-201ENST00000248054 URB1-AS1Q96HZ7 61 aa11.99□□□□□ -0.49
SIN3B-201ENST00000248054 PFN2P35080 140 aa11.98□□□□□ -0.49
SIN3B-201ENST00000248054 U3KQE9 123 aa11.98□□□□□ -0.49
SIN3B-201ENST00000248054 NCOR2Q9Y618 2525 aa11.98□□□□□ -0.49
SIN3B-201ENST00000248054 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
SIN3B-201ENST00000248054 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
SIN3B-201ENST00000248054 GATA1P15976 413 aaPredicted RBP11.97□□□□□ -0.49
SIN3B-201ENST00000248054 HCFC1P51610 2035 aa11.96□□□□□ -0.49
SIN3B-201ENST00000248054 H0YGX0 51 aa11.96□□□□□ -0.49
SIN3B-201ENST00000248054 APRG1Q8IVJ8 170 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 PIFOQ8TCI5 191 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 TLN1Q9Y490 2541 aaKnown RBP11.96□□□□□ -0.5
SIN3B-201ENST00000248054 C11orf86A6NJI1 115 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 H3BQ85 93 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 ODF1Q14990 250 aa11.96□□□□□ -0.5
SIN3B-201ENST00000248054 CHD7Q9P2D1 2997 aa11.95□□□□□ -0.5
SIN3B-201ENST00000248054 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
SIN3B-201ENST00000248054 DAZ4Q86SG3 579 aaKnown RBP11.95□□□□□ -0.5
SIN3B-201ENST00000248054 DAZ3Q9NR90 486 aaKnown RBP11.95□□□□□ -0.5
SIN3B-201ENST00000248054 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
SIN3B-201ENST00000248054 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
SIN3B-201ENST00000248054 F5H768 121 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 Q8N1Y9 231 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 Q9H8V8 135 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 CDK2AP2O75956 126 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
SIN3B-201ENST00000248054 CRLF1O75462 422 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 IGLC6P0CF74 106 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 CFHR3Q02985 330 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 RMI2Q96E14 147 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 K7EQG2 157 aa11.94□□□□□ -0.5
SIN3B-201ENST00000248054 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
SIN3B-201ENST00000248054 XGP55808 180 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 TRACP01848 142 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 NOP10Q9NPE3 64 aaKnown RBP11.93□□□□□ -0.5
SIN3B-201ENST00000248054 NKAPP1Q8N9T2 125 aa11.93□□□□□ -0.5
SIN3B-201ENST00000248054 CRIP2P52943 208 aaPredicted RBP11.93□□□□□ -0.5
SIN3B-201ENST00000248054 CITED2Q99967 270 aaPredicted RBP11.93□□□□□ -0.5
SIN3B-201ENST00000248054 DEFB121Q5J5C9 76 aa11.92□□□□□ -0.5
SIN3B-201ENST00000248054 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SIN3B-201ENST00000248054 ORMDL1Q9P0S3 153 aa11.92□□□□□ -0.5
SIN3B-201ENST00000248054 PSMB8P28062 276 aa11.92□□□□□ -0.5
SIN3B-201ENST00000248054 BAALC-AS2P0C853 105 aa11.92□□□□□ -0.5
SIN3B-201ENST00000248054 NDUFA11Q86Y39 141 aa11.91□□□□□ -0.5
SIN3B-201ENST00000248054 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
SIN3B-201ENST00000248054 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
SIN3B-201ENST00000248054 A4D1N5 150 aa11.91□□□□□ -0.5
SIN3B-201ENST00000248054 ZNF80P51504 273 aaPredicted RBP11.91□□□□□ -0.5
SIN3B-201ENST00000248054 BRI3O95415 125 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 ZNF580Q9UK33 172 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 SMAD5-AS1Q9Y6J3 95 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 H3BT86 120 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 K7EQD1 137 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 MAP6D1Q9H9H5 199 aa11.9□□□□□ -0.5
SIN3B-201ENST00000248054 C5orf42Q9H799 3197 aa11.89□□□□□ -0.51
SIN3B-201ENST00000248054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
SIN3B-201ENST00000248054 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
SIN3B-201ENST00000248054 PSCAO43653 123 aa11.89□□□□□ -0.51
SIN3B-201ENST00000248054 RANBP2P49792 3224 aaKnown RBP11.89□□□□□ -0.51
SIN3B-201ENST00000248054 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
SIN3B-201ENST00000248054 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
SIN3B-201ENST00000248054 ZNF702PQ9H963 129 aa11.88□□□□□ -0.51
SIN3B-201ENST00000248054 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
SIN3B-201ENST00000248054 NXPH4O95158 308 aa11.88□□□□□ -0.51
SIN3B-201ENST00000248054 Q6ZSV7 163 aa11.87□□□□□ -0.51
SIN3B-201ENST00000248054 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
SIN3B-201ENST00000248054 HAMPP81172 84 aa11.87□□□□□ -0.51
SIN3B-201ENST00000248054 CCDC179H3BU77 68 aa11.87□□□□□ -0.51
SIN3B-201ENST00000248054 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
SIN3B-201ENST00000248054 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
SIN3B-201ENST00000248054 TCL1BO95988 128 aa11.86□□□□□ -0.51
SIN3B-201ENST00000248054 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
SIN3B-201ENST00000248054 DEFB114Q30KQ6 69 aa11.86□□□□□ -0.51
SIN3B-201ENST00000248054 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
SIN3B-201ENST00000248054 MAPKAPK5-AS1Q8N8E1 139 aa11.86□□□□□ -0.51
SIN3B-201ENST00000248054 TMEM263Q8WUH6 116 aaKnown RBP11.86□□□□□ -0.51
SIN3B-201ENST00000248054 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
SIN3B-201ENST00000248054 A0A0B4J2C4 111 aa11.85□□□□□ -0.51
SIN3B-201ENST00000248054 SHISA2Q6UWI4 295 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
SIN3B-201ENST00000248054 ATRXP46100 2492 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms