RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CFHR3Q02985 330 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 OVOL1O14753 267 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 TSSC4Q9Y5U2 329 aaPredicted RBP8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 OR11H12B2RN74 326 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 ETDBQ3ZM63 59 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 OR11H1Q8NG94 326 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 OR11H2Q8NH07 326 aa8.92□□□□□ -0.98
SEC61A1-201ENST00000243253 OPRPNQ99935 248 aaPredicted RBP8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 TSPAN13O95857 204 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 ASIPP42127 132 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 KLHL30-AS1Q8NEE0 82 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 MRPL16Q9NX20 251 aaKnown RBP8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 TEP1Q99973 2627 aaKnown RBP8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 A0A0J9YY99 117 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 PRSS2P07478 247 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 NPC2P61916 151 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 ZNRF2Q8NHG8 242 aa8.91□□□□□ -0.98
SEC61A1-201ENST00000243253 PSMB2P49721 201 aa8.9□□□□□ -0.98
SEC61A1-201ENST00000243253 DEFB112Q30KQ8 113 aa8.9□□□□□ -0.98
SEC61A1-201ENST00000243253 DCANP1Q8TF63 244 aa8.9□□□□□ -0.98
SEC61A1-201ENST00000243253 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
SEC61A1-201ENST00000243253 FAM104AQ969W3 186 aa8.9□□□□□ -0.98
SEC61A1-201ENST00000243253 A0A0U1RRA0 63 aa8.9□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHG2P01859 326 aa8.9□□□□□ -0.99
SEC61A1-201ENST00000243253 GAGE13Q4V321 117 aa8.9□□□□□ -0.99
SEC61A1-201ENST00000243253 ATRQ13535 2644 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 ADARB2-AS1A8MUL3 147 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 SAMD13Q5VXD3 122 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 ZFP2Q6ZN57 461 aa8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 HOXA3O43365 443 aaPredicted RBP8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 ZNF469Q96JG9 3925 aaPredicted RBP8.89□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 TRBV27A0A0K0K1C4 114 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 MSMBP08118 114 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 ATP6V0E2Q8NHE4 81 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 H3BUA1 57 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 ZNF876PQ49A33 203 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 C18orf65Q6ZTR6 163 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 TRBV6-5A0A0K0K1A5 114 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 LGALS9O00182 355 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 SUMO4Q6EEV6 95 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 NDUFA11Q86Y39 141 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
SEC61A1-201ENST00000243253 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 FOXI1Q12951 378 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 ZNF815PA8K554 130 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 CFC1P0CG37 223 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 MDFICQ9P1T7 246 aa8.87□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHV3-38A0A0C4DH36 116 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 A6NDX4 124 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 P0DMU3 169 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 C1QTNF4Q9BXJ3 329 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 LINC01549A6NIU2 74 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 J3QR89 54 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 USMG5Q96IX5 58 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 TP53TG1Q9Y2A0 90 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 APCP25054 2843 aa8.86□□□□□ -0.99
SEC61A1-201ENST00000243253 IGKV3OR2-268A0A0C4DH90 116 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 PPP1R17O96001 155 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 RNF152Q8N8N0 203 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 SETXQ7Z333 2677 aaKnown RBP8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 IGHV3-53P01767 116 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 KRTAP10-9P60411 292 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 PMVKQ15126 192 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 CEMP1Q6PRD7 247 aaPredicted RBP8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 UBE2E2Q96LR5 201 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 DAZ1Q9NQZ3 744 aaKnown RBP8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
SEC61A1-201ENST00000243253 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
SEC61A1-201ENST00000243253 M0QY20 66 aa8.84□□□□□ -0.99
SEC61A1-201ENST00000243253 SLURP1P55000 103 aa8.84□□□□□ -0.99
SEC61A1-201ENST00000243253 RAX2Q96IS3 184 aa8.84□□□□□ -0.99
SEC61A1-201ENST00000243253 NDUFS8O00217 210 aa8.84□□□□□ -1
SEC61A1-201ENST00000243253 TCL1BO95988 128 aa8.84□□□□□ -1
SEC61A1-201ENST00000243253 PROK1P58294 105 aa8.84□□□□□ -1
SEC61A1-201ENST00000243253 NSUN5P1Q3KNT7 163 aa8.83□□□□□ -1
SEC61A1-201ENST00000243253 LINC01600Q96MT4 127 aa8.83□□□□□ -1
SEC61A1-201ENST00000243253 K7EMT4 169 aa8.83□□□□□ -1
SEC61A1-201ENST00000243253 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
SEC61A1-201ENST00000243253 DEFB131AP59861 70 aa8.82□□□□□ -1
SEC61A1-201ENST00000243253 CIDEAO60543 219 aa8.82□□□□□ -1
SEC61A1-201ENST00000243253 C10orf105Q8TEF2 133 aa8.82□□□□□ -1
SEC61A1-201ENST00000243253 ODF3Q96PU9 254 aa8.82□□□□□ -1
SEC61A1-201ENST00000243253 TMEM223A0PJW6 202 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms