RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 RIGQ13278 110 aa13.19□□□□□ -0.3
CENPA-201ENST00000233505 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
CENPA-201ENST00000233505 LELP1Q5T871 98 aa13.19□□□□□ -0.3
CENPA-201ENST00000233505 NEXN-AS1Q8NBZ9 246 aa13.19□□□□□ -0.3
CENPA-201ENST00000233505 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
CENPA-201ENST00000233505 SIVA1O15304 175 aa13.18□□□□□ -0.3
CENPA-201ENST00000233505 FRZBQ92765 325 aa13.18□□□□□ -0.3
CENPA-201ENST00000233505 DNAJC30Q96LL9 226 aa13.18□□□□□ -0.3
CENPA-201ENST00000233505 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
CENPA-201ENST00000233505 A0A087WWC5 75 aa13.17□□□□□ -0.3
CENPA-201ENST00000233505 A0A1B0GW15 77 aa13.17□□□□□ -0.3
CENPA-201ENST00000233505 K7EP13 123 aa13.16□□□□□ -0.3
CENPA-201ENST00000233505 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
CENPA-201ENST00000233505 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
CENPA-201ENST00000233505 TRAV8-6A0A0B4J262 113 aa13.15□□□□□ -0.3
CENPA-201ENST00000233505 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
CENPA-201ENST00000233505 BTF3P20290 206 aaKnown RBP13.15□□□□□ -0.3
CENPA-201ENST00000233505 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
CENPA-201ENST00000233505 M0R2N4 97 aa13.14□□□□□ -0.31
CENPA-201ENST00000233505 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
CENPA-201ENST00000233505 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
CENPA-201ENST00000233505 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.14□□□□□ -0.31
CENPA-201ENST00000233505 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
CENPA-201ENST00000233505 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
CENPA-201ENST00000233505 S100A8P05109 93 aa13.13□□□□□ -0.31
CENPA-201ENST00000233505 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
CENPA-201ENST00000233505 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
CENPA-201ENST00000233505 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
CENPA-201ENST00000233505 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
CENPA-201ENST00000233505 IGHV3-38A0A0C4DH36 116 aa13.12□□□□□ -0.31
CENPA-201ENST00000233505 A0A1B0GXF2 115 aa13.12□□□□□ -0.31
CENPA-201ENST00000233505 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
CENPA-201ENST00000233505 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
CENPA-201ENST00000233505 CTDSP1Q9GZU7 261 aa13.12□□□□□ -0.31
CENPA-201ENST00000233505 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
CENPA-201ENST00000233505 KRTAP1-5Q9BYS1 174 aa13.11□□□□□ -0.31
CENPA-201ENST00000233505 TRAV9-2A0A087WT02 112 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 TRAV26-2A0A0B4J265 109 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 HBBP68871 147 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 FAT2Q9NYQ8 4349 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 DNAH17Q9UFH2 4485 aa13.1□□□□□ -0.31
CENPA-201ENST00000233505 TRBV6-8A0A0A6YYG3 113 aa13.09□□□□□ -0.31
CENPA-201ENST00000233505 RAB4AP20338 218 aa13.09□□□□□ -0.31
CENPA-201ENST00000233505 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
CENPA-201ENST00000233505 TRBV6-5A0A0K0K1A5 114 aa13.08□□□□□ -0.32
CENPA-201ENST00000233505 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.32
CENPA-201ENST00000233505 MRPL54Q6P161 138 aaKnown RBP13.08□□□□□ -0.32
CENPA-201ENST00000233505 AMN1Q8IY45 258 aa13.08□□□□□ -0.32
CENPA-201ENST00000233505 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
CENPA-201ENST00000233505 CAMPP49913 170 aa13.07□□□□□ -0.32
CENPA-201ENST00000233505 RHEBQ15382 184 aa13.07□□□□□ -0.32
CENPA-201ENST00000233505 FAM104BQ5XKR9 115 aa13.07□□□□□ -0.32
CENPA-201ENST00000233505 C6orf223Q8N319 242 aa13.07□□□□□ -0.32
CENPA-201ENST00000233505 CHCHD7Q9BUK0 85 aa13.07□□□□□ -0.32
CENPA-201ENST00000233505 KCNIP4Q6PIL6 250 aa13.06□□□□□ -0.32
CENPA-201ENST00000233505 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
CENPA-201ENST00000233505 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
CENPA-201ENST00000233505 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 RTL8CO15255 209 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 PPP1R17O96001 155 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 PKIAP61925 76 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
CENPA-201ENST00000233505 RPL39LQ96EH5 51 aaKnown RBP13.05□□□□□ -0.32
CENPA-201ENST00000233505 C7orf77A4D0Y5 90 aa13.04□□□□□ -0.32
CENPA-201ENST00000233505 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
CENPA-201ENST00000233505 NTM-AS1Q6ZSK4 140 aa13.04□□□□□ -0.32
CENPA-201ENST00000233505 NIT1Q86X76 327 aa13.04□□□□□ -0.32
CENPA-201ENST00000233505 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
CENPA-201ENST00000233505 HECTD4Q9Y4D8 3996 aa13.02□□□□□ -0.32
CENPA-201ENST00000233505 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.33
CENPA-201ENST00000233505 IGHV1-24A0A0C4DH33 117 aa13.02□□□□□ -0.33
CENPA-201ENST00000233505 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
CENPA-201ENST00000233505 LAGE3Q14657 143 aa13.02□□□□□ -0.33
CENPA-201ENST00000233505 IBA57-AS1B1ANH7 110 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 NCR2O95944 276 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 COTL1Q14019 142 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 SVBPQ8N300 66 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 NRACQ8N912 160 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 ST20Q9HBF5 79 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 URGCP-MRPS24S4R325 110 aa13.01□□□□□ -0.33
CENPA-201ENST00000233505 APOC3P02656 99 aa13□□□□□ -0.33
CENPA-201ENST00000233505 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
CENPA-201ENST00000233505 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
CENPA-201ENST00000233505 TRBV24-1A0A075B6N3 115 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 A0A087WX48 190 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 SNAPINO95295 136 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 IGHV3-30P01768 117 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 PPBPP02775 128 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 IGHV3-30-3P0DP02 117 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 IGHV3-30-5P0DP03 117 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 S100PP25815 95 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 POLR2KP53803 58 aaKnown RBP12.99□□□□□ -0.33
CENPA-201ENST00000233505 CHCHD5Q9BSY4 110 aa12.99□□□□□ -0.33
CENPA-201ENST00000233505 TRBV27A0A0K0K1C4 114 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms