RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 MRPS16Q9Y3D3 137 aaKnown RBP12.41□□□□□ -0.42
PFN1-201ENST00000225655 H7C1H1 209 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 K7EQD1 137 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 SNAPINO95295 136 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 GYPEP15421 78 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 SRIP30626 198 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 SLC25A29Q8N8R3 303 aa12.4□□□□□ -0.42
PFN1-201ENST00000225655 S100PP25815 95 aa12.39□□□□□ -0.43
PFN1-201ENST00000225655 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
PFN1-201ENST00000225655 IMMP2LQ96T52 175 aa12.39□□□□□ -0.43
PFN1-201ENST00000225655 KRTAP1-5Q9BYS1 174 aa12.39□□□□□ -0.43
PFN1-201ENST00000225655 DYNC1H1Q14204 4646 aaKnown RBP12.39□□□□□ -0.43
PFN1-201ENST00000225655 A0A096LPF7 62 aa12.38□□□□□ -0.43
PFN1-201ENST00000225655 EVI2AP22794 236 aa12.38□□□□□ -0.43
PFN1-201ENST00000225655 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 C16orf90A8MZG2 172 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
PFN1-201ENST00000225655 ATP5L2Q7Z4Y8 100 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
PFN1-201ENST00000225655 RPS10P5Q9NQ39 176 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
PFN1-201ENST00000225655 A0A087WWC5 75 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 HBBP68871 147 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 BTF3L4Q96K17 158 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 KIF25-AS1Q9Y6Z4 181 aa12.36□□□□□ -0.43
PFN1-201ENST00000225655 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
PFN1-201ENST00000225655 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
PFN1-201ENST00000225655 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
PFN1-201ENST00000225655 TRAV9-1A0A075B6T8 112 aa12.34□□□□□ -0.43
PFN1-201ENST00000225655 CAMPP49913 170 aa12.34□□□□□ -0.43
PFN1-201ENST00000225655 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
PFN1-201ENST00000225655 Q6ZSN1 163 aa12.34□□□□□ -0.43
PFN1-201ENST00000225655 FRZBQ92765 325 aa12.34□□□□□ -0.43
PFN1-201ENST00000225655 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 GAGE1Q13065 139 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 GAGE4Q13068 117 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 GAGE5Q13069 117 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
PFN1-201ENST00000225655 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
PFN1-201ENST00000225655 LINC00315P59091 139 aa12.32□□□□□ -0.44
PFN1-201ENST00000225655 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
PFN1-201ENST00000225655 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
PFN1-201ENST00000225655 TNFRSF18Q9Y5U5 241 aa12.32□□□□□ -0.44
PFN1-201ENST00000225655 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
PFN1-201ENST00000225655 SIVA1O15304 175 aa12.31□□□□□ -0.44
PFN1-201ENST00000225655 RASL11AQ6T310 242 aa12.31□□□□□ -0.44
PFN1-201ENST00000225655 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
PFN1-201ENST00000225655 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
PFN1-201ENST00000225655 MRAP2Q96G30 205 aa12.3□□□□□ -0.44
PFN1-201ENST00000225655 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
PFN1-201ENST00000225655 M0QY20 66 aa12.29□□□□□ -0.44
PFN1-201ENST00000225655 PPP1R17O96001 155 aa12.29□□□□□ -0.44
PFN1-201ENST00000225655 TIRAPP58753 221 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 NEXN-AS1Q8NBZ9 246 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 GTSF1LQ9H1H1 148 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
PFN1-201ENST00000225655 RAB4AP20338 218 aa12.27□□□□□ -0.45
PFN1-201ENST00000225655 FAM104BQ5XKR9 115 aa12.27□□□□□ -0.45
PFN1-201ENST00000225655 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
PFN1-201ENST00000225655 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
PFN1-201ENST00000225655 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
PFN1-201ENST00000225655 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 UBE2D3P61077 147 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 UBE2D2P62837 147 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 COX19Q49B96 90 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 Q6ZRN7 208 aaPredicted RBP12.26□□□□□ -0.45
PFN1-201ENST00000225655 GATD1Q8NB37 220 aa12.26□□□□□ -0.45
PFN1-201ENST00000225655 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
PFN1-201ENST00000225655 KRTAP10-2P60368 255 aa12.25□□□□□ -0.45
PFN1-201ENST00000225655 OR10J3Q5JRS4 329 aa12.25□□□□□ -0.45
PFN1-201ENST00000225655 PPBPP02775 128 aa12.24□□□□□ -0.45
PFN1-201ENST00000225655 CKS2P33552 79 aa12.24□□□□□ -0.45
PFN1-201ENST00000225655 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
PFN1-201ENST00000225655 LELP1Q5T871 98 aa12.23□□□□□ -0.45
PFN1-201ENST00000225655 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
PFN1-201ENST00000225655 ST20Q9HBF5 79 aa12.23□□□□□ -0.45
PFN1-201ENST00000225655 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
PFN1-201ENST00000225655 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
PFN1-201ENST00000225655 Q9UF83 564 aa12.22□□□□□ -0.45
PFN1-201ENST00000225655 HSPG2P98160 4391 aa12.21□□□□□ -0.45
PFN1-201ENST00000225655 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.45
PFN1-201ENST00000225655 K7EP13 123 aa12.21□□□□□ -0.45
PFN1-201ENST00000225655 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
PFN1-201ENST00000225655 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
PFN1-201ENST00000225655 RPL39LQ96EH5 51 aaKnown RBP12.21□□□□□ -0.45
PFN1-201ENST00000225655 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
PFN1-201ENST00000225655 NCR2O95944 276 aa12.2□□□□□ -0.46
PFN1-201ENST00000225655 MT-ND6P03923 174 aa12.2□□□□□ -0.46
PFN1-201ENST00000225655 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
PFN1-201ENST00000225655 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
PFN1-201ENST00000225655 D6R8Y8 96 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms