RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TSHBP01222 138 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV1-69P01742 117 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 LINC00315P59091 139 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 ZNF876PQ49A33 203 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 TP53TG1Q9Y2A0 90 aa11.95□□□□□ -0.5
SF3A2-201ENST00000221494 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 A0A0B4J2C4 111 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 G3V318 75 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 P0DMU3 169 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 FAM231AP0DMU4 169 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 LINC01356Q8N9X3 169 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 MAPK1IP1LQ8NDC0 245 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 TRAV41A0A0B4J266 112 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 GATA3P23771 443 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 XGP55808 180 aa11.94□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 A0A0J9YX75 114 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 AVPP01185 164 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV4-38-2P0DP08 117 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 RHOHQ15669 191 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 MOB4Q9Y3A3 225 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
SF3A2-201ENST00000221494 LGALS9O00182 355 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 MT-ATP8P03928 68 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 BRD3OSQ6XYD6 125 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 AMELXQ99217 191 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 KLLNB2CW77 178 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 J3QQQ9 107 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 LEPROTO15243 131 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 IGF1P05019 195 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
SF3A2-201ENST00000221494 FHL3Q13643 280 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 USMG5Q96IX5 58 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 SPANXA1Q9NS26 97 aa11.92□□□□□ -0.5
SF3A2-201ENST00000221494 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
SF3A2-201ENST00000221494 RNASE4P34096 147 aaKnown RBP11.91□□□□□ -0.5
SF3A2-201ENST00000221494 NSUN5P1Q3KNT7 163 aa11.91□□□□□ -0.5
SF3A2-201ENST00000221494 Q96MF0 132 aa11.91□□□□□ -0.5
SF3A2-201ENST00000221494 UNC79Q9P2D8 2635 aa11.91□□□□□ -0.5
SF3A2-201ENST00000221494 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 SUMO4Q6EEV6 95 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 ANKRD29Q8N6D5 301 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 ZANQ9Y493 2812 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 ODF3Q96PU9 254 aa11.9□□□□□ -0.5
SF3A2-201ENST00000221494 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
SF3A2-201ENST00000221494 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
SF3A2-201ENST00000221494 RNF183Q96D59 192 aa11.89□□□□□ -0.51
SF3A2-201ENST00000221494 SLC25A20O43772 301 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 TSPEAR-AS2P59090 65 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 TMEM170BQ5T4T1 132 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 PDZD2O15018 2839 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 LINC01548A6NM66 108 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 J3QLI3 93 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 GNRH2O43555 120 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 SRD5A1P18405 259 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 FAM159AQ6UWV7 190 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 Q6ZS46 218 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
SF3A2-201ENST00000221494 TMEM223A0PJW6 202 aa11.87□□□□□ -0.51
SF3A2-201ENST00000221494 Q6Q795 121 aa11.87□□□□□ -0.51
SF3A2-201ENST00000221494 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
SF3A2-201ENST00000221494 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
SF3A2-201ENST00000221494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.512e-9■■■■□ 23.6
SF3A2-201ENST00000221494 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
SF3A2-201ENST00000221494 ITPR2Q14571 2701 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 MUC4Q99102 2169 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 B5MCH6 92 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 RPL13AP40429 203 aaKnown RBP11.86□□□□□ -0.51
SF3A2-201ENST00000221494 ATXN8Q156A1 80 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 WFDC11Q8NEX6 87 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 CREBBPQ92793 2442 aa11.86□□□□□ -0.51
SF3A2-201ENST00000221494 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 C9orf85Q96MD7 179 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 FASNP49327 2511 aaKnown RBP11.85□□□□□ -0.51
SF3A2-201ENST00000221494 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 K7EMT4 169 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
SF3A2-201ENST00000221494 ANAPC13Q9BS18 74 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
SF3A2-201ENST00000221494 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
SF3A2-201ENST00000221494 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
SF3A2-201ENST00000221494 HECTD1Q9ULT8 2610 aa11.84□□□□□ -0.51
SF3A2-201ENST00000221494 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
SF3A2-201ENST00000221494 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
SF3A2-201ENST00000221494 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
SF3A2-201ENST00000221494 C9JAW5 83 aa11.83□□□□□ -0.52
SF3A2-201ENST00000221494 M0R2P5 195 aa11.83□□□□□ -0.52
SF3A2-201ENST00000221494 RHODO00212 210 aa11.83□□□□□ -0.52
SF3A2-201ENST00000221494 MRPL23Q16540 153 aaKnown RBP11.83□□□□□ -0.52
SF3A2-201ENST00000221494 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
SF3A2-201ENST00000221494 FSHBP01225 129 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms