RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 SNRPD3P62318 126 aaKnown RBP8.47□□□□□ -1.05
ACTN1-201ENST00000193403 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 GATA3P23771 443 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-201ENST00000193403 LY6G5BQ8NDX9 201 aa8.47□□□□□ -1.05
ACTN1-201ENST00000193403 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.05
ACTN1-201ENST00000193403 PRSS47A8MTI9 375 aa8.46□□□□□ -1.05
ACTN1-201ENST00000193403 MOB4Q9Y3A3 225 aa8.46□□□□□ -1.05
ACTN1-201ENST00000193403 DCHS2Q6V1P9 2916 aa8.46□□□□□ -1.05
ACTN1-201ENST00000193403 CFC1BP0CG36 223 aa8.46□□□□□ -1.06
ACTN1-201ENST00000193403 CFC1P0CG37 223 aa8.46□□□□□ -1.06
ACTN1-201ENST00000193403 ZFAND2AQ8N6M9 145 aa8.46□□□□□ -1.06
ACTN1-201ENST00000193403 TRAV8-3A0A0A6YYJ7 113 aa8.46□□□□□ -1.06
ACTN1-201ENST00000193403 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.06
ACTN1-201ENST00000193403 CENPVL3A0A0U1RRI6 287 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 UBE2E1P51965 193 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-201ENST00000193403 SRSF2Q01130 221 aaKnown RBP8.45□□□□□ -1.06
ACTN1-201ENST00000193403 TCTEX1D4Q5JR98 221 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 DAND5Q8N907 189 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 PRO0461Q9UI25 63 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 HIST2H2BCQ6DN03 193 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-201ENST00000193403 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
ACTN1-201ENST00000193403 IGHV4-38-2P0DP08 117 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 C15orf53Q8NAA6 179 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 LINC01587Q99440 93 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 IGF2-ASQ6U949 168 aa8.44□□□□□ -1.06
ACTN1-201ENST00000193403 DEFB136Q30KP8 78 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 M0R2P5 195 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 RNASE1P07998 156 aaKnown RBP8.43□□□□□ -1.06
ACTN1-201ENST00000193403 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 ZNF580Q9UK33 172 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 EDN2P20800 178 aa8.43□□□□□ -1.06
ACTN1-201ENST00000193403 H3BMM0 161 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
ACTN1-201ENST00000193403 ADORA2A-AS1P86434 159 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 DAZ1Q9NQZ3 744 aaKnown RBP8.42□□□□□ -1.06
ACTN1-201ENST00000193403 A8MZ25 164 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 GAGE5Q13069 117 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 GAGE6Q13070 117 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
ACTN1-201ENST00000193403 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
ACTN1-201ENST00000193403 ANKRD17O75179 2603 aaKnown RBP8.41□□□□□ -1.06
ACTN1-201ENST00000193403 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-201ENST00000193403 P0DMU3 169 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 UBE2D1P51668 147 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 FHL3Q13643 280 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 C5orf56Q8N8D9 126 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 IGHV4-61A0A0C4DH41 118 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 Q8N6K4 173 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 SIRPDQ9H106 197 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
ACTN1-201ENST00000193403 FAM223BA6NKX1 122 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 NDUFA4O00483 81 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 DEFB131AP59861 70 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 FAM223AQ8IWN6 122 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 Q8N1Y9 231 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 PRM2P04554 102 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 IFITM1P13164 125 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 PSMG3-AS1Q96PY0 264 aa8.4□□□□□ -1.06
ACTN1-201ENST00000193403 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
ACTN1-201ENST00000193403 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.07
ACTN1-201ENST00000193403 Q6ZSV7 163 aa8.4□□□□□ -1.07
ACTN1-201ENST00000193403 AJUBAQ96IF1 538 aa8.4□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV1-69DA0A0B4J2H0 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 CRYGDP07320 174 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 CFHR3Q02985 330 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 COL27A1Q8IZC6 1860 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-201ENST00000193403 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-201ENST00000193403 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-201ENST00000193403 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 GAGE12JA6NER3 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 GAGE7O76087 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms