RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 NTM-AS1Q6ZSK4 140 aa10.32□□□□□ -0.76
ERCC1-201ENST00000013807 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.32□□□□□ -0.76
ERCC1-201ENST00000013807 PRR34Q9NV39 138 aa10.32□□□□□ -0.76
ERCC1-201ENST00000013807 PFDN1O60925 122 aa10.31□□□□□ -0.76
ERCC1-201ENST00000013807 IGLV2-8P01709 118 aa10.31□□□□□ -0.76
ERCC1-201ENST00000013807 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
ERCC1-201ENST00000013807 MIAQ16674 131 aa10.31□□□□□ -0.76
ERCC1-201ENST00000013807 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
ERCC1-201ENST00000013807 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
ERCC1-201ENST00000013807 BCL2L11O43521 198 aa10.3□□□□□ -0.76
ERCC1-201ENST00000013807 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
ERCC1-201ENST00000013807 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
ERCC1-201ENST00000013807 CRPP02741 224 aa10.29□□□□□ -0.76
ERCC1-201ENST00000013807 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
ERCC1-201ENST00000013807 RPL35P42766 123 aaKnown RBP10.29□□□□□ -0.76
ERCC1-201ENST00000013807 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
ERCC1-201ENST00000013807 KRTAP26-1Q6PEX3 210 aa10.29□□□□□ -0.76
ERCC1-201ENST00000013807 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
ERCC1-201ENST00000013807 KANTRA0A1W2PQU2 76 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 IGLC6P0CF74 106 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 IQCJQ1A5X6 159 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 AP1S3Q96PC3 154 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 CHCHD5Q9BSY4 110 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
ERCC1-201ENST00000013807 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
ERCC1-201ENST00000013807 F5H697 171 aa10.27□□□□□ -0.77
ERCC1-201ENST00000013807 M0QY20 66 aa10.27□□□□□ -0.77
ERCC1-201ENST00000013807 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
ERCC1-201ENST00000013807 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
ERCC1-201ENST00000013807 TRBV25-1A0A075B6N4 114 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 A0A1B0GV50 99 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 USP17L23D6RBM5 183 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 OXTP01178 125 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 PRSS1P07477 247 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 RAB5CP51148 216 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 RBX1P62877 108 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 CCL20P78556 96 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
ERCC1-201ENST00000013807 H7C1H1 209 aa10.25□□□□□ -0.77
ERCC1-201ENST00000013807 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
ERCC1-201ENST00000013807 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 F2Z2F3 143 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 CACNG7P62955 275 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
ERCC1-201ENST00000013807 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
ERCC1-201ENST00000013807 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
ERCC1-201ENST00000013807 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
ERCC1-201ENST00000013807 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 P01737 135 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 SSTP61278 116 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 GAGE6Q13070 117 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 WDR73Q6P4I2 378 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
ERCC1-201ENST00000013807 PGLYRP4Q96LB8 373 aa10.22□□□□□ -0.77
ERCC1-201ENST00000013807 GZMBP10144 247 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 CNBPP62633 177 aaKnown RBP10.21□□□□□ -0.77
ERCC1-201ENST00000013807 REG3AQ06141 175 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 EIF5AL1Q6IS14 154 aaKnown RBP10.21□□□□□ -0.77
ERCC1-201ENST00000013807 C9orf62Q8N4C0 152 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
ERCC1-201ENST00000013807 TRBV20OR9-2A0A075B6H5 130 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 XKRY2A2RUG3 117 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 TEX46H3BTG2 121 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 PDE6DO43924 150 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 SULT1A2P50226 295 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
ERCC1-201ENST00000013807 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
ERCC1-201ENST00000013807 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 CNFNQ9BYD5 112 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 NIT2Q9NQR4 276 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 BIN3Q9NQY0 253 aa10.2□□□□□ -0.78
ERCC1-201ENST00000013807 TRGC1P0CF51 173 aa10.19□□□□□ -0.78
ERCC1-201ENST00000013807 GNG4P50150 75 aa10.19□□□□□ -0.78
ERCC1-201ENST00000013807 FAT3Q8TDW7 4589 aa10.19□□□□□ -0.78
ERCC1-201ENST00000013807 RAB19A4D1S5 217 aa10.18□□□□□ -0.78
ERCC1-201ENST00000013807 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
ERCC1-201ENST00000013807 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
ERCC1-201ENST00000013807 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
ERCC1-201ENST00000013807 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
ERCC1-201ENST00000013807 IFNA1P01562 189 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 MGPP08493 103 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 NTF3P20783 257 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 CTRLP40313 264 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 RPL37AP61513 92 aaKnown RBP10.17□□□□□ -0.78
ERCC1-201ENST00000013807 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 LYZL1Q6UWQ5 148 aa10.17□□□□□ -0.78
ERCC1-201ENST00000013807 PKHD1L1Q86WI1 4243 aa10.16□□□□□ -0.78
ERCC1-201ENST00000013807 IGLV4-60A0A075B6I1 120 aa10.16□□□□□ -0.78
ERCC1-201ENST00000013807 PANO1I0J062 215 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms