RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Slc35d2Q762D5 326 aa13.46□□□□□ -0.25
Pcdh1-203ENSMUST00000160721 Nhlrc3Q8CCH2 347 aa13.46□□□□□ -0.25
Pcdh1-203ENSMUST00000160721 Srd5a2Q99N99 254 aa13.46□□□□□ -0.25
Pcdh1-203ENSMUST00000160721 Atp5lQ9CPQ8 103 aa13.46□□□□□ -0.25
Pcdh1-203ENSMUST00000160721 Rnf115Q9D0C1 305 aa13.46□□□□□ -0.25
Pcdh1-203ENSMUST00000160721 Gm21913J3KML9 361 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm21776J3QPJ5 361 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gata2O09100 480 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 St6galnac2P70277 373 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Psg22Q810J1 475 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 H2-M10.4Q85ZW8 331 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cd200r5Q8BTP3 270 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Ifitm7G3X9Z2 141 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm21394Q497R7 227 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Defa23Q5G866 93 aa13.46□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Asxl3Q8C4A5 2259 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Znf260Q62513 407 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Ormdl3Q9CPZ6 153 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm45871A0A1B0GRI9 540 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Defa1P11477 93 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 LgalslbQ7TPX9 165 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tmem126aQ9D8Y1 196 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cnn3Q9DAW9 330 aaKnown RBP13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Fam89bQ9QUI1 189 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Frrs1lB1AXV0 293 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Rnf217D3YYI7 515 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 H2-DMb2Q31099 261 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Mob4Q6PEB6 225 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Wdr82Q8BFQ4 313 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Efna4O08542 206 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 P2ry6Q9ERK9 328 aa13.45□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Kif26aQ52KG5 1881 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Spint5J3KMK8 105 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 P04212 136 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 CampP51437 172 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tmem88bQ3TYP4 173 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 BC106179Q8C9L1 186 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Nrn1Q8CFV4 142 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 MturnQ8CGA4 131 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Zfp950A0A0U1RQ46 609 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Igh-3P01867 404 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Xaf1Q5NBU8 273 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Klhdc1Q80YG3 406 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Lhx2Q9Z0S2 406 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Ep300B2RWS6 2412 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Trav7-4A0A075B6C1 113 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Trav7d-4Q5R1H9 113 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Smim19Q80ZU4 107 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm10283Q8C3L5 117 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Anapc13Q8R034 74 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr1258Q8VGN6 311 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Pglyrp3A1A547 347 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm10428J3QNV7 132 aa13.44□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm16503Q8C6M9 103 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 EppinQ9DA01 134 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 HilpdaQ9JLS0 64 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Ighv5-4A0A075B5P9 117 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Psg18B2RSG7 476 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Loxl4Q924C6 757 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Scrt1Q99M85 348 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 H2afb1Q9CQ70 111 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Fmc1Q9CR13 113 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tmem50aQ9CXL1 157 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tmem170aQ9D342 144 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 P01638 115 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Dctn5Q9QZB9 182 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tcrg-V5A0A0G2JGV5 113 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Hist1h2bmP10854 126 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Nkain3Q3URJ8 181 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Tmem171Q4KL18 322 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Hist1h2bhQ64478 126 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Hist2h2bbQ64525 126 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Spink6Q8BT20 105 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cldn23Q9D7D7 296 aa13.43□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gsx1P31315 261 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr235E9Q9Z6 312 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Hs3st6Q5GFD5 342 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Spock3Q8BKV0 436 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Ovol2Q8CIV7 274 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Prelid3aQ8VE85 172 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 St6galnac3Q9WUV2 305 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm13030A2APQ6 143 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Sumo2P61957 95 aaKnown RBP13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm12888Q3UW77 119 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm10118Q8C8J5 116 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 GaptQ8CB93 157 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gatad1Q920S3 266 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cox6cQ9CPQ1 76 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 1700015F17RikD3YUK8 150 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm21789J3QMZ1 123 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm21870J3QPN2 123 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm21883J3QPV3 123 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Trav6d-4Q5R1I0 115 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Sh2d6Q9D413 297 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Efemp2Q9WVJ9 443 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 F11rO88792 300 aa13.42□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Med13Q5SWW4 2171 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Igkv6-14A0A140T8P1 115 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm17727E9Q4V7 109 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms