RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Hist3h2bbQ8CGP0 126 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Hist3h2baQ9D2U9 126 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Timp1P12032 205 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Sdr39u1Q5M8N4 308 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Trav15-2-dv6-2A0A075B650 123 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Saa1P05366 122 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Sp7Q8VI67 428 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Fam219aQ9D772 157 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Kcne3Q9WTW2 103 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Trbv1A0A0B4J1G7 116 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Igkv4-71A0A0G2JEH0 117 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 PmvkQ9D1G2 192 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Cend1Q9JKC6 149 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Vmn1r70Q8R254 298 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 RprmQ9JJ72 109 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 DscamQ9ERC8 2013 aa15.76■□□□□ 0.11
Trim71-201ENSMUST00000111816 Fam117aQ7TNF9 451 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Glipr1Q9CWG1 255 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Prr30Q9D9B7 401 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Hoxd11P23813 323 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Olfr749E9Q438 313 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 CfdP03953 259 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 GrhprQ91Z53 328 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Marveld3Q9D956 376 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tanc1Q0VGY8 1856 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Trav16nA0A075B634 117 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Cmc4Q61908 68 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ighv6-3A0A075B5T2 118 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Rtn4rl2Q7M6Z0 420 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Nkx2-8O70584 235 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 AdoQ6PDY2 256 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 CklfQ9DAS1 152 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Rnd2Q9QYM5 227 aa15.75■□□□□ 0.11
Trim71-201ENSMUST00000111816 Trav6n-7A0A075B6A6 116 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Gm10767Q3TQP0 103 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 P01670 111 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 P01671 111 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 P01672 111 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 RhogP84096 191 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Gm10842Q3U587 122 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Abca2P41234 2434 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Zgrf1Q0VGT4 1863 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Sc5dO88822 299 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 P01759 136 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tff1Q08423 87 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Znf146Q8BQN6 292 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Clec14aQ8VCP9 459 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Spink14B9EJP9 96 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Olfr92L7N475 312 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 St6galnac2P70277 373 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ube2wQ8VDW4 151 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Defb7Q91V70 71 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 4931428L18RikQ9D4S9 127 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 DptQ9QZZ6 201 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 VegfbP49766 207 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tnks1bp1P58871 1720 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 GlmpQ9JHJ3 404 aa15.74■□□□□ 0.11
Trim71-201ENSMUST00000111816 SellP18337 372 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Vmn1r235Q8R297 328 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Gm35549A0A0N4SUS7 141 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ca5aP23589 299 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Col9a1Q05722 921 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 B230307C23RikQ8BLB2 64 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ube2cQ9D1C1 179 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Sdf2l1Q9ESP1 221 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Fbxo15Q9QZN0 433 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Pglyrp3A1A547 347 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ssbp3Q9D032 388 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Gm29289A0A087WPY7 166 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Zfp362B1ASA5 418 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Olfr317Q5NCD6 327 aa15.73■□□□□ 0.11
Trim71-201ENSMUST00000111816 Trbv17A0A140T8P8 114 aa15.72■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tmem241Q3UME2 297 aa15.72■□□□□ 0.11
Trim71-201ENSMUST00000111816 Olfr223Q8VF69 319 aa15.72■□□□□ 0.11
Trim71-201ENSMUST00000111816 Arid2E9Q7E2 1828 aa15.72■□□□□ 0.11
Trim71-201ENSMUST00000111816 Adamtsl3G3UXC7 1706 aa15.72■□□□□ 0.11
Trim71-201ENSMUST00000111816 Olfr753-ps1A0A140LHN3 164 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 SNORCQ9CXL7 121 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Dusp14Q9JLY7 198 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tdgf1P51865 171 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Klk14Q8CGR5 250 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tmem29A2ANF5 204 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Wdr31Q9JHB4 367 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Cxcl1P12850 96 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tmem207P86045 143 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Ube2zQ3UE37 356 aa15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Rbm38Q62176 237 aaKnown RBP15.71■□□□□ 0.11
Trim71-201ENSMUST00000111816 Tspan7Q62283 249 aa15.71■□□□□ 0.1
Trim71-201ENSMUST00000111816 Rln3Q8CHK2 141 aa15.71■□□□□ 0.1
Trim71-201ENSMUST00000111816 Cdcp2Q8BQH6 427 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 PyyQ9EPS2 98 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 BC067074F6RXI4 2391 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 Ighv1-15A0A0A6YXA5 117 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 Ucp1P12242 307 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 MdkP12025 140 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 Cdkn1bP46414 197 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 2900055J20RikQ9D6G3 140 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 Q149G0 166 aaKnown RBP15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 H2-M10.4Q85ZW8 331 aa15.7■□□□□ 0.1
Trim71-201ENSMUST00000111816 Lgals6O54891 301 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms