RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ZFP2Q6ZN57 461 aa6.44□□□□□ -1.38
SCARB2-225ENST00000640900 SYT8Q8NBV8 401 aa6.44□□□□□ -1.38
SCARB2-225ENST00000640900 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
SCARB2-225ENST00000640900 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
SCARB2-225ENST00000640900 STARD9Q9P2P6 4700 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 A0A1B0GW15 77 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 ELOBQ15370 118 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 C11orf45Q8TAV5 145 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 BTF3L4Q96K17 158 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 SAMD10Q9BYL1 202 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 TMEM191AQ9H0A3 160 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 JPT2Q9H910 190 aa6.43□□□□□ -1.38
SCARB2-225ENST00000640900 MUC21A0A0G2JKD1 596 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 MUC21A0A140T8X8 626 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 M0R381 172 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 GAGE7O76087 117 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 GAGE12FP0CL80 117 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 GAGE12GP0CL81 117 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 GAGE12IP0CL82 117 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 EVI2AP22794 236 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 DAD1P61803 113 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 RIGQ13278 110 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 FHL2Q14192 279 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 SPANXN1Q5VSR9 72 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 ZNF479Q96JC4 524 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 SMCO4Q9NRQ5 59 aa6.42□□□□□ -1.38
SCARB2-225ENST00000640900 RHODO00212 210 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 GATA1P15976 413 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-225ENST00000640900 HOXA5P20719 270 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
SCARB2-225ENST00000640900 HBBP68871 147 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 TWIST1Q15672 202 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 Q6ZTC4 211 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 FRZBQ92765 325 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 RNF185Q96GF1 192 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 AP1S3Q96PC3 154 aa6.41□□□□□ -1.38
SCARB2-225ENST00000640900 TRGV2A0A075B6R0 118 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 IGHV3-53P01767 116 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 ATP5G1P05496 136 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 S100PP25815 95 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 TMEM88Q6PEY1 159 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 Q6ZSN1 163 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 CBLN2Q8IUK8 224 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 C14orf178Q8N769 122 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-225ENST00000640900 OR4C5Q8NGB2 326 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 URGCP-MRPS24S4R325 110 aa6.4□□□□□ -1.38
SCARB2-225ENST00000640900 A0A087WWL8 130 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 TGIF2-C20orf24A0A0A6YYL0 155 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 TRBV6-4A0A1B0GX49 114 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 COLCA2A8K830 154 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 H3BNG1 76 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 SCO1O75880 301 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 S100A8P05109 93 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 RAB4BP61018 213 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 FAM104BQ5XKR9 115 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
SCARB2-225ENST00000640900 TMEM136Q6ZRR5 245 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 BORCS7Q96B45 105 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 GNB1LQ9BYB4 327 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 DPH3P1Q9H4G8 78 aa6.39□□□□□ -1.39
SCARB2-225ENST00000640900 M0QY20 66 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 LINC00694P0DN24 101 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 RAB4AP20338 218 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 CRYBA4P53673 196 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 SLAQ13239 276 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 COX19Q49B96 90 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 FAM210BQ96KR6 192 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
SCARB2-225ENST00000640900 TRAV10A0A0B4J240 114 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 PHOX2AO14813 284 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 CAMPP49913 170 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 SSTP61278 116 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 AMN1Q8IY45 258 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 SLC25A29Q8N8R3 303 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 Q9UF83 564 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 HHLA3Q9XRX5 114 aa6.37□□□□□ -1.39
SCARB2-225ENST00000640900 TENM2Q9NT68 2774 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 DEFB131BA0A096LNP1 70 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 HLA-DQA1P01909 254 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 MT-ND6P03923 174 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 MRPL51Q4U2R6 128 aaKnown RBP6.36□□□□□ -1.39
SCARB2-225ENST00000640900 SUMO4Q6EEV6 95 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 SMIM15Q7Z3B0 74 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 NRACQ8N912 160 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 PHLDA1Q8WV24 401 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-225ENST00000640900 MRAP2Q96G30 205 aa6.36□□□□□ -1.39
SCARB2-225ENST00000640900 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms