RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CCDC168Q8NDH2 2452 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 KPNA4O00629 521 aaPredicted RBP-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 NDUFS6O75380 124 aaKnown RBP-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 SMIM6P0DI80 62 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 NEK7Q8TDX7 302 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 OR2J1Q9GZK6 312 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 GAPVD1Q14C86 1478 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 ARFGEF1Q9Y6D6 1849 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 MTORP42345 2549 aa-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 GOLGA4Q13439 2230 aaKnown RBP-3.75□□□□□ -3.01
LMBR1-222ENST00000638959 KIF13AQ9H1H9 1805 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 A0A087WUJ7 227 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 LOC100506127A0A0U1RQW1 187 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 TRPC5OSA6NMA1 111 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 H0YAA0 97 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 IFNGP01579 166 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 CALB1P05937 261 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 MAXP61244 160 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 BASP1P80723 227 aaKnown RBP-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 BAGE3Q86Y29 109 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 NDUFA11Q86Y39 141 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 TEX29Q8N6K0 151 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 GPX7Q96SL4 187 aaPredicted RBP-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 NRXN2Q9P2S2 1712 aa-3.76□□□□□ -3.01
LMBR1-222ENST00000638959 PIK3C2GO75747 1445 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 IGHV1-24A0A0C4DH33 117 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 H0YJX3 145 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 OR5H6Q8NGV6 325 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 AGPAT3Q9NRZ7 376 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 IMP3Q9NV31 184 aaKnown RBP-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 ADAMTS12P58397 1594 aa-3.77□□□□□ -3.01
LMBR1-222ENST00000638959 PARP14Q460N5 1801 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 GCN1Q92616 2671 aaKnown RBP-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 FAM92AA1XBS5 289 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 CLDN24A6NM45 220 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 SYS1-DBNDD2H3BUS1 97 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 SLC25A4P12235 298 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 SKP1P63208 163 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 CLDN22Q8N7P3 220 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 PTPN23Q9H3S7 1636 aa-3.78□□□□□ -3.01
LMBR1-222ENST00000638959 SLIT1O75093 1534 aa-3.79□□□□□ -3.02
LMBR1-222ENST00000638959 MORN4Q8NDC4 146 aa-3.79□□□□□ -3.02
LMBR1-222ENST00000638959 PRELID3BQ9Y3B1 194 aa-3.79□□□□□ -3.02
LMBR1-222ENST00000638959 HMGB3O15347 200 aaKnown RBP-3.8□□□□□ -3.02
LMBR1-222ENST00000638959 SLC25A6P12236 298 aa-3.8□□□□□ -3.02
LMBR1-222ENST00000638959 OGNP20774 298 aaKnown RBP-3.8□□□□□ -3.02
LMBR1-222ENST00000638959 CKS2P33552 79 aa-3.8□□□□□ -3.02
LMBR1-222ENST00000638959 LAMTOR3Q9UHA4 124 aa-3.8□□□□□ -3.02
LMBR1-222ENST00000638959 ANKRD31Q8N7Z5 1873 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 COX8AP10176 69 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 BLCAPP62952 87 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 TMEM91Q6ZNR0 172 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 PRELID3AQ96N28 172 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 IL20Q9NYY1 176 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 FAM135BQ49AJ0 1406 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 CD109Q6YHK3 1445 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 SNAPC4Q5SXM2 1469 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 DLC1Q96QB1 1528 aa-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 UTP20O75691 2785 aaKnown RBP-3.81□□□□□ -3.02
LMBR1-222ENST00000638959 TRAV16A0A0A6YYK6 109 aaPredicted RBP-3.82□□□□□ -3.02
LMBR1-222ENST00000638959 DEFB1P60022 68 aa-3.82□□□□□ -3.02
LMBR1-222ENST00000638959 MT1XP80297 61 aa-3.82□□□□□ -3.02
LMBR1-222ENST00000638959 SIKE1Q9BRV8 207 aa-3.82□□□□□ -3.02
LMBR1-222ENST00000638959 CAMSAP2Q08AD1 1489 aa-3.82□□□□□ -3.02
LMBR1-222ENST00000638959 IBTKQ9P2D0 1353 aaPredicted RBP-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 CPSF4LA6NMK7 179 aaKnown RBP-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 DEXIO95424 95 aa-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 SPCS2Q15005 226 aa-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 PTH2Q96A98 100 aa-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 ERG28Q9UKR5 140 aa-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 MYH1P12882 1939 aa-3.83□□□□□ -3.02
LMBR1-222ENST00000638959 K7EP34 96 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 MT1HL1P0DM35 61 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 OTOSQ8NHW6 89 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 CHD7Q9P2D1 2997 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 PYCARDQ9ULZ3 195 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 NDUFAF1Q9Y375 327 aa-3.84□□□□□ -3.02
LMBR1-222ENST00000638959 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 TRAV12-3A0A0B4J271 114 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 C9orf92A6NGG3 77 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 FABP2P12104 132 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 SCGB2B2Q4G0G5 96 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 CCDC122Q5T0U0 273 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 SLC25A26Q70HW3 274 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 LRTM1Q9HBL6 345 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 COL6A5A8TX70 2615 aa-3.85□□□□□ -3.03
LMBR1-222ENST00000638959 MAP1LC3B2A6NCE7 125 aa-3.86□□□□□ -3.03
LMBR1-222ENST00000638959 IFNA16P05015 189 aa-3.86□□□□□ -3.03
LMBR1-222ENST00000638959 NCALDP61601 193 aa-3.86□□□□□ -3.03
LMBR1-222ENST00000638959 Q6JHZ5 121 aa-3.86□□□□□ -3.03
LMBR1-222ENST00000638959 FRYQ5TBA9 3013 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 PITX3O75364 302 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 RTL8BQ17RB0 113 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 OR51A4Q8NGJ6 313 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 SMIM4Q8WVI0 70 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 AMELXQ99217 191 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 RTL8AQ9BWD3 113 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 NAA60Q9H7X0 242 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 TAS2R8Q9NYW2 309 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 USE1Q9NZ43 259 aa-3.87□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms