RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 GTF2A1P52655 376 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFA6P56556 154 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 EDDM3BP56851 147 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 AP3S2P59780 193 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 RAB5BP61020 215 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 RANP62826 216 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 BTG2P78543 158 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 ITGB3BPQ13352 177 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR8B8Q15620 311 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 BCL2L15Q5TBC7 163 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 Q5VV11 94 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SCIMPQ6UWF3 145 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 ALKAL1Q6UXT8 129 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IZUMO2Q6UXV1 221 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM91Q6ZNR0 172 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFA11Q86Y39 141 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 STX12Q86Y82 276 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TRAPPC5Q8IUR0 188 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 IFT20Q8IY31 132 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 C20orf196Q8IYI0 205 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR8I2Q8N0Y5 310 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 KRT222Q8N1A0 295 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 C20orf197Q8N268 126 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TTC9CQ8N5M4 171 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 FAM216BQ8N7L0 139 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 OR5A2Q8NGI9 324 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PIGXQ8TBF5 258 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PP6455Q8WZ26 134 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PRELID3AQ96N28 172 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SMIM7Q9BQ49 75 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 WFDC6Q9BQY6 131 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 NPCDR1Q9BY65 106 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 MAP1LC3BQ9GZQ8 125 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 C11orf68Q9H3H3 251 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TPT1P8Q9HAU6 139 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 CACYBPQ9HB71 228 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 LRTM1Q9HBL6 345 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 C19orf12Q9NSK7 152 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TVP23BQ9NYZ1 205 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 VPS29Q9UBQ0 182 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 STOML2Q9UJZ1 356 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 ERG28Q9UKR5 140 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 TPRKBQ9Y3C4 175 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 UFC1Q9Y3C8 167 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 R4GMQ9 66 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PLXNB2O15031 1838 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PTPN23Q9H3S7 1636 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 MYH10P35580 1976 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SIPA1L3O60292 1781 aaPredicted RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 COL14A1Q05707 1796 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 PCF11O94913 1555 aaKnown RBP-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 SETBP1Q9Y6X0 1596 aa-0.32□□□□□ -2.46
CCDC7-211ENST00000638889 FREM2Q5SZK8 3169 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 ARHGEF11O15085 1522 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MAP3K1Q13233 1512 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 ZMYM4Q5VZL5 1548 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 NISCHQ9Y2I1 1504 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PLXNA1Q9UIW2 1896 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 VIRMAQ69YN4 1812 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 CDK12Q9NYV4 1490 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TRAV12-3A0A0B4J271 114 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MMP24-AS1A0A0U1RRL7 71 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 UBE2L5PA0A1B0GUS4 154 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 EXOC1LA0A1B0GW35 172 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 LINC01546A6NGU7 62 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM238C9JI98 176 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM256-PLSCR3K7ERE1 68 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 AIPO00170 330 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SIX6O95475 246 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PPP1R17O96001 155 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 HLA-DRB1P01911 266 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 APOC3P02656 99 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MT-ND6P03923 174 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 CALB1P05937 261 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 CST2P09228 141 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PIRTP0C851 137 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SPART-AS1P0CW21 52 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SMIM10L2AP0DMW4 78 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SMIM10L2BP0DMW5 78 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SLC25A6P12236 298 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TPT1P13693 172 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 HLA-DRB4P13762 266 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 S100PP25815 95 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SNCAP37840 140 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 OMPP47874 163 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 INSL3P51460 131 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 DYNLT3P51808 116 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMBIM6P55061 237 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 ARPP19P56211 112 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 B2MP61769 119 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 UBA52P62987 128 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SEC11AP67812 179 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 UBE2L3P68036 154 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MRPS36P82909 103 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PMAIP1Q13794 54 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 COTL1Q14019 142 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 COX17Q14061 63 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SPCS2Q15005 226 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MSMO1Q15800 293 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms