RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SLAQ13239 276 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 SPINK13Q1W4C9 94 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 LINC01559Q495D7 138 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 C1QTNF4Q9BXJ3 329 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 SMIM9A6NGZ8 99 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 F2Z2F3 143 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 SERF1AO75920 110 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 ORM1P02763 201 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 ARMS2P0C7Q2 107 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 CTRLP40313 264 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 ZNF80P51504 273 aaPredicted RBP5.52□□□□□ -1.53
PNKP-229ENST00000637897 NUTF2P61970 127 aaKnown RBP5.52□□□□□ -1.53
PNKP-229ENST00000637897 KIAA1644Q3SXP7 199 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 LYZL1Q6UWQ5 148 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 Q6ZR54 194 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 TMEM256Q8N2U0 113 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 FER1L6-AS1Q8NA97 138 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 OR8A1Q8NGG7 326 aa5.52□□□□□ -1.53
PNKP-229ENST00000637897 DNAH5Q8TE73 4624 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 IGLC6P0CF74 106 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 SPART-AS1P0CW21 52 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 S100A12P80511 92 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 EBLN2Q6P2I7 272 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 ZNF493Q6ZR52 646 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 POM121L12Q8N7R1 296 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 C18orf32Q8TCD1 76 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 KCNS1Q96KK3 526 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 ALKBH7Q9BT30 221 aaPredicted RBP5.51□□□□□ -1.53
PNKP-229ENST00000637897 TPPP3Q9BW30 176 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 SSBP4Q9BWG4 385 aaPredicted RBP5.51□□□□□ -1.53
PNKP-229ENST00000637897 NIT2Q9NQR4 276 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 TP53TG3Q9ULZ0 132 aa5.51□□□□□ -1.53
PNKP-229ENST00000637897 TMSB15BA0A087X1C1 80 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 TRAV21A0A0B4J279 112 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 M0R2N4 97 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 JOSD1Q15040 202 aaPredicted RBP5.5□□□□□ -1.53
PNKP-229ENST00000637897 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 ZFAND2AQ8N6M9 145 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 FAM19A4Q96LR4 140 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 ODF3Q96PU9 254 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 CNFNQ9BYD5 112 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 SAMD10Q9BYL1 202 aa5.5□□□□□ -1.53
PNKP-229ENST00000637897 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
PNKP-229ENST00000637897 IGKV3D-20A0A0C4DH25 116 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 NUPR1O60356 82 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 GPX1P07203 203 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 LEPP41159 167 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 LINC00310P59036 64 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 CACNG7P62955 275 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 RRN3P1Q2M238 152 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 Q6ZQT7 251 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 LINC00612Q8N6U2 182 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 NDUFAF3Q9BU61 184 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 GOLT1BQ9Y3E0 138 aa5.49□□□□□ -1.53
PNKP-229ENST00000637897 IGLV2-18A0A075B6J9 118 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 ZNF324O75467 553 aaPredicted RBP5.48□□□□□ -1.53
PNKP-229ENST00000637897 HSBP1O75506 76 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 DUSP14O95147 198 aaKnown RBP5.48□□□□□ -1.53
PNKP-229ENST00000637897 OR5AL1P0C617 328 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 PMCHP20382 165 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 NTF3P20783 257 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 TSPOP30536 169 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 AMTP48728 403 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 TWIST1Q15672 202 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 IQCJQ1A5X6 159 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 LGALS9BQ3B8N2 356 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 FAM104BQ5XKR9 115 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 SMIM15Q7Z3B0 74 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 RNASE8Q8TDE3 154 aaKnown RBP5.48□□□□□ -1.53
PNKP-229ENST00000637897 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
PNKP-229ENST00000637897 TMEM191AQ9H0A3 160 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 MUC4Q99102 2169 aa5.48□□□□□ -1.53
PNKP-229ENST00000637897 KLLNB2CW77 178 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 SNAI2O43623 268 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 INSP01308 110 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 PPBPP02775 128 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 P0DMU3 169 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 FAM231AP0DMU4 169 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 FAM231CP0DMU5 169 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 HTN3P15516 51 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 RAB4AP20338 218 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 RNASE4P34096 147 aaKnown RBP5.47□□□□□ -1.53
PNKP-229ENST00000637897 NIT1Q86X76 327 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 ZNF575Q86XF7 245 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 LAMTOR2Q9Y2Q5 125 aa5.47□□□□□ -1.53
PNKP-229ENST00000637897 PCP4L1A6NKN8 68 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 LYRM9A8MSI8 78 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 LINC00614P0C842 121 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 DEFB130BP0DP73 79 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 DEFB130AP0DP74 79 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 ASIPP42127 132 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 CDKN1BP46527 198 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 DAD1P61803 113 aa5.46□□□□□ -1.54
PNKP-229ENST00000637897 PRR9Q5T870 116 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms