RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 NTF3P20783 257 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 LEPP41159 167 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 CD164L2Q6UWJ8 174 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 C7orf71A4D174 169 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 GNRH2O43555 120 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 OR10D4PQ8NGN7 298 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
CACNA1A-244ENST00000637625 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 AMBPP02760 352 aa9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 PRSS2P07478 247 aa9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 HERV-K104P63124 156 aa9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
CACNA1A-244ENST00000637625 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 S100A8P05109 93 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 HLA-DRB4P13762 266 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 S100A4P26447 101 aaKnown RBP9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 CDKN1BP46527 198 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 HLA-DRB4X5D2U9 266 aa9.26□□□□□ -0.93
CACNA1A-244ENST00000637625 A0A1B0GW15 77 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 ASIPP42127 132 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 ODF3Q96PU9 254 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 NIPBLQ6KC79 2804 aaeCLIP9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 H3BMM0 161 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 NCR2O95944 276 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 Q0VG73 95 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 GATD1Q8NB37 220 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 WFDC10AQ9H1F0 79 aa9.25□□□□□ -0.93
CACNA1A-244ENST00000637625 TRAV25A0A0B4J276 109 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 M0R381 172 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1A1P0DJD3 496 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1CP0DJD4 496 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 PMCHP20382 165 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 ZNF493Q6ZR52 646 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 KRTAP9-4Q9BYQ2 154 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
CACNA1A-244ENST00000637625 D6R8Y8 96 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 SNAI2O43623 268 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 ZNF324O75467 553 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 CD7P09564 240 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 TSPOP30536 169 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 MRPL51Q4U2R6 128 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 LINC00518Q8N0U6 118 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 OR11H12B2RN74 326 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 IGLV1-51P01701 117 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 RNASE3P12724 160 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 C12orf57Q99622 126 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 SAMD10Q9BYL1 202 aa9.23□□□□□ -0.93
CACNA1A-244ENST00000637625 JMJD1CQ15652 2540 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 IGLV9-49A0A0B4J1Y8 123 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 OR5AL1P0C617 328 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 HTN1P15515 57 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 EVI2AP22794 236 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 RIPPLY3P57055 190 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
CACNA1A-244ENST00000637625 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.93
CACNA1A-244ENST00000637625 CRXO43186 299 aaPredicted RBP9.21□□□□□ -0.93
CACNA1A-244ENST00000637625 GAS8-AS1O95177 125 aa9.21□□□□□ -0.93
CACNA1A-244ENST00000637625 TMEM191AQ9H0A3 160 aa9.21□□□□□ -0.93
CACNA1A-244ENST00000637625 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 PRM2P04554 102 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 S100A12P80511 92 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 PYY3Q5JQD4 70 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 KRTAP9-9Q9BYP9 154 aa9.21□□□□□ -0.94
CACNA1A-244ENST00000637625 MUC4Q99102 2169 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 IGHV1OR15-1A0A075B7D0 117 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 A8MTW9 85 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 CACNG7P62955 275 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 ERASQ7Z444 233 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 CITED1Q99966 193 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 MDFICQ9P1T7 246 aa9.2□□□□□ -0.94
CACNA1A-244ENST00000637625 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
CACNA1A-244ENST00000637625 ESDP10768 282 aa9.19□□□□□ -0.94
CACNA1A-244ENST00000637625 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms