RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 EREGO14944 169 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 SULT1A2P50226 295 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 CCL20P78556 96 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 GAGE1Q13065 139 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 GAGE4Q13068 117 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 GAGE5Q13069 117 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 LELP1Q5T871 98 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 UFSP1Q6NVU6 142 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 Q6ZNX1 250 aa12.43□□□□□ -0.42
CLN6-214ENST00000636314 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
CLN6-214ENST00000636314 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
CLN6-214ENST00000636314 LINC01556Q5JQF7 62 aa12.42□□□□□ -0.42
CLN6-214ENST00000636314 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CLN6-214ENST00000636314 C11orf52Q96A22 123 aa12.42□□□□□ -0.42
CLN6-214ENST00000636314 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
CLN6-214ENST00000636314 MLST8Q9BVC4 326 aa12.42□□□□□ -0.42
CLN6-214ENST00000636314 A0A087WWL8 130 aa12.41□□□□□ -0.42
CLN6-214ENST00000636314 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
CLN6-214ENST00000636314 C14orf178Q8N769 122 aaPredicted RBP12.41□□□□□ -0.42
CLN6-214ENST00000636314 CXCL1P09341 107 aa12.4□□□□□ -0.42
CLN6-214ENST00000636314 AKAP14Q86UN6 197 aa12.4□□□□□ -0.42
CLN6-214ENST00000636314 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
CLN6-214ENST00000636314 hCG_2014768A0A024R1R8 64 aa12.39□□□□□ -0.43
CLN6-214ENST00000636314 IFNA1P01562 189 aa12.39□□□□□ -0.43
CLN6-214ENST00000636314 INAFM2P0DMQ5 153 aa12.39□□□□□ -0.43
CLN6-214ENST00000636314 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 IGHV3-30-3P0DP02 117 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
CLN6-214ENST00000636314 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 Q9UF83 564 aa12.38□□□□□ -0.43
CLN6-214ENST00000636314 OR10AG1Q8NH19 301 aa12.37□□□□□ -0.43
CLN6-214ENST00000636314 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
CLN6-214ENST00000636314 VPS13BQ7Z7G8 4022 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 A0A087WTM6 91 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 A0A087WWC5 75 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 IBA57-AS1B1ANH7 110 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 SNAI2O43623 268 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 PSCAO43653 123 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 PDE6DO43924 150 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 FUSP35637 526 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLN6-214ENST00000636314 Q9HAA7 133 aa12.36□□□□□ -0.43
CLN6-214ENST00000636314 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
CLN6-214ENST00000636314 BCL2P10415 239 aa12.35□□□□□ -0.43
CLN6-214ENST00000636314 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
CLN6-214ENST00000636314 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
CLN6-214ENST00000636314 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
CLN6-214ENST00000636314 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
CLN6-214ENST00000636314 GNG4P50150 75 aa12.34□□□□□ -0.43
CLN6-214ENST00000636314 ZNF56Q15929 161 aa12.34□□□□□ -0.43
CLN6-214ENST00000636314 CDPF1Q6NVV7 123 aa12.34□□□□□ -0.43
CLN6-214ENST00000636314 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
CLN6-214ENST00000636314 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
CLN6-214ENST00000636314 LAGE3Q14657 143 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
CLN6-214ENST00000636314 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
CLN6-214ENST00000636314 MED9Q9NWA0 146 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CLN6-214ENST00000636314 RAB19A4D1S5 217 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 IGLV2-8P01709 118 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 TAGLN2P37802 199 aaKnown RBP12.32□□□□□ -0.44
CLN6-214ENST00000636314 RAB4BP61018 213 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 Q5VSD8 79 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 Q8N3U1 123 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 FAT1Q14517 4588 aa12.32□□□□□ -0.44
CLN6-214ENST00000636314 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
CLN6-214ENST00000636314 SSTP61278 116 aa12.31□□□□□ -0.44
CLN6-214ENST00000636314 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
CLN6-214ENST00000636314 FRZBQ92765 325 aa12.31□□□□□ -0.44
CLN6-214ENST00000636314 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
CLN6-214ENST00000636314 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
CLN6-214ENST00000636314 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
CLN6-214ENST00000636314 XGP55808 180 aa12.3□□□□□ -0.44
CLN6-214ENST00000636314 BIN3Q9NQY0 253 aa12.3□□□□□ -0.44
CLN6-214ENST00000636314 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
CLN6-214ENST00000636314 TRBV20OR9-2A0A075B6H5 130 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 C19orf71A6NCJ1 209 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 SMIM17P0DL12 118 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 GZMBP10144 247 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 UBE2D3P61077 147 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 UBE2D2P62837 147 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 TOR2AQ5JU69 321 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 ALKAL2Q6UX46 152 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 FER1L6-AS1Q8NA97 138 aa12.29□□□□□ -0.44
CLN6-214ENST00000636314 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
CLN6-214ENST00000636314 F5H697 171 aa12.28□□□□□ -0.44
CLN6-214ENST00000636314 P01737 135 aa12.28□□□□□ -0.44
CLN6-214ENST00000636314 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
CLN6-214ENST00000636314 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
CLN6-214ENST00000636314 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CLN6-214ENST00000636314 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
CLN6-214ENST00000636314 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
CLN6-214ENST00000636314 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.45
CLN6-214ENST00000636314 IGLC6P0CF74 106 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms