RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 COPZ2Q9P299 210 aa-2.07□□□□□ -2.74
CDKL5-210ENST00000636046 CFDP1Q9UEE9 299 aaPredicted RBP-2.07□□□□□ -2.74
CDKL5-210ENST00000636046 PYCARDQ9ULZ3 195 aa-2.07□□□□□ -2.74
CDKL5-210ENST00000636046 MPC1Q9Y5U8 109 aa-2.07□□□□□ -2.74
CDKL5-210ENST00000636046 ECM29Q5VYK3 1845 aa-2.07□□□□□ -2.74
CDKL5-210ENST00000636046 POLR1AO95602 1720 aaPredicted RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 TMEM94Q12767 1356 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ABCC11Q96J66 1382 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 USP32Q8NFA0 1604 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 TRAV8-7A0A075B6U6 113 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 UQCR11O14957 56 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 RER1O15258 196 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 STX6O43752 255 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 C3orf79P0CE67 100 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ADCYAP1P18509 176 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CCL1P22362 96 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CFL1P23528 166 aaKnown RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CCND2P30279 289 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 SNCAP37840 140 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 OMPP47874 163 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 LINC00158P58513 81 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 UBE2G2P60604 165 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 UBE2KP61086 200 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ATP6V0D1P61421 351 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CDC37Q16543 378 aaPredicted RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 RESP18Q5W5W9 173 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 HBMQ6B0K9 141 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CCDC91Q7Z6B0 441 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 BAGE2Q86Y30 109 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 NEK7Q8TDX7 302 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 GLYATL2Q8WU03 294 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 C10orf82Q8WW14 230 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 NT5C3BQ969T7 300 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 PPP1R14BQ96C90 147 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 SCLT1Q96NL6 688 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 TIPINQ9BVW5 301 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 TPPP3Q9BW30 176 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 C11orf68Q9H3H3 251 aaKnown RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 MAP1LC3AQ9H492 121 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 FAM96AQ9H5X1 160 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ARMC7Q9H6L4 198 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 NOP10Q9NPE3 64 aaKnown RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ZC4H2Q9NQZ6 224 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 SPANXB1Q9NS25 103 aaPredicted RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 SDHAF2Q9NX18 166 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 FBXL12Q9NXK8 326 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 PSENENQ9NZ42 101 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CHMP5Q9NZZ3 219 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 DNAJB9Q9UBS3 223 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 MYO5AQ9Y4I1 1855 aaKnown RBP-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 ATAD2BQ9ULI0 1458 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 C4AP0C0L4 1744 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 C4BP0C0L5 1744 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 TOGARAM1Q9Y4F4 1720 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 PTPRGP23470 1445 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 CD109Q6YHK3 1445 aa-2.08□□□□□ -2.74
CDKL5-210ENST00000636046 SBNO2Q9Y2G9 1366 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 LOC100130705A0A1B0GUX0 176 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 EXOC1LA0A1B0GW35 172 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 DISC1C4P0D8 188 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 ENSAO43768 121 aaKnown RBP-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 EIF3JO75822 258 aaKnown RBP-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 FAM107AO95990 144 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 IAPPP10997 89 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 SLC25A6P12236 298 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 CXCL2P19875 107 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 ATP6V1C1P21283 382 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 GALP22466 123 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 RPA3P35244 121 aaPredicted RBP-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 CRYBA4P53673 196 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 CARD18P57730 90 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 TPPP2P59282 170 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 ANAPC15P60006 121 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 SEC61GP60059 68 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 EXOC3L4Q17RC7 722 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 C2orf76Q3KRA6 126 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 CCDC184Q52MB2 194 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 C6orf183Q5T699 404 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 FAM45AQ8TCE6 357 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 DCUN1D1Q96GG9 259 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 CHMP4AQ9BY43 222 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 NMNAT1Q9HAN9 279 aaPredicted RBP-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 A0A0G2JMZ2 1700 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 PKD1L3Q7Z443 1732 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 EEA1Q15075 1411 aa-2.09□□□□□ -2.74
CDKL5-210ENST00000636046 TRBV20-1A0A075B6N2 111 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 A0A1B0GTQ1 180 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 A0A1B0GU69 56 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 PCP4L1A6NKN8 68 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 PPP5D1E7EU14 171 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 M0QY20 66 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 BIRC5O15392 142 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 FIBPO43427 364 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 ATP6V1G2O95670 118 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 IFNA6P05013 189 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 IFNA4P05014 189 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 LINC00614P0C842 121 aa-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 UBCP0CG48 685 aaKnown RBP-2.1□□□□□ -2.75
CDKL5-210ENST00000636046 LIMS3P0CW19 117 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms