RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PHOX2AO14813 284 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 RANP62826 216 aaKnown RBP11.46□□□□□ -0.57
CLN6-212ENST00000636020 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 ALKAL2Q6UX46 152 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 PTH2Q96A98 100 aa11.46□□□□□ -0.57
CLN6-212ENST00000636020 PSMG3Q9BT73 122 aaPredicted RBP11.46□□□□□ -0.57
CLN6-212ENST00000636020 IFNA7P01567 189 aa11.45□□□□□ -0.58
CLN6-212ENST00000636020 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
CLN6-212ENST00000636020 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
CLN6-212ENST00000636020 NPCDR1Q9BY65 106 aa11.45□□□□□ -0.58
CLN6-212ENST00000636020 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
CLN6-212ENST00000636020 FGF8P55075 233 aaPredicted RBP11.44□□□□□ -0.58
CLN6-212ENST00000636020 ZFP2Q6ZN57 461 aa11.44□□□□□ -0.58
CLN6-212ENST00000636020 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
CLN6-212ENST00000636020 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
CLN6-212ENST00000636020 PARLQ9H300 379 aa11.44□□□□□ -0.58
CLN6-212ENST00000636020 F6UZH7 168 aa11.43□□□□□ -0.58
CLN6-212ENST00000636020 FAM74A1Q5RGS3 127 aa11.43□□□□□ -0.58
CLN6-212ENST00000636020 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
CLN6-212ENST00000636020 EIF5AL1Q6IS14 154 aaKnown RBP11.43□□□□□ -0.58
CLN6-212ENST00000636020 OR2G3Q8NGZ4 309 aa11.43□□□□□ -0.58
CLN6-212ENST00000636020 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
CLN6-212ENST00000636020 PGPA6NDG6 321 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 C17orf112F2Z3M2 114 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 SULT1A2P50226 295 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 KCNIP4Q6PIL6 250 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
CLN6-212ENST00000636020 C11orf21Q9P2W6 132 aa11.42□□□□□ -0.58
CLN6-212ENST00000636020 SERF2P84101 59 aa11.41□□□□□ -0.58
CLN6-212ENST00000636020 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
CLN6-212ENST00000636020 PLAC8Q9NZF1 115 aa11.41□□□□□ -0.58
CLN6-212ENST00000636020 CHTF8P0CG12 524 aa11.4□□□□□ -0.58
CLN6-212ENST00000636020 TREM1Q9NP99 234 aa11.4□□□□□ -0.58
CLN6-212ENST00000636020 KCNIP2Q9NS61 270 aa11.4□□□□□ -0.58
CLN6-212ENST00000636020 A0A0U1RQV1 116 aa11.39□□□□□ -0.59
CLN6-212ENST00000636020 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
CLN6-212ENST00000636020 CRPP02741 224 aa11.39□□□□□ -0.59
CLN6-212ENST00000636020 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
CLN6-212ENST00000636020 A8MWV9 139 aa11.38□□□□□ -0.59
CLN6-212ENST00000636020 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
CLN6-212ENST00000636020 RAB5CP51148 216 aa11.38□□□□□ -0.59
CLN6-212ENST00000636020 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
CLN6-212ENST00000636020 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
CLN6-212ENST00000636020 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
CLN6-212ENST00000636020 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
CLN6-212ENST00000636020 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
CLN6-212ENST00000636020 OR7C2O60412 319 aa11.37□□□□□ -0.59
CLN6-212ENST00000636020 RAB2AP61019 212 aa11.37□□□□□ -0.59
CLN6-212ENST00000636020 CLLU1Q5K131 121 aa11.37□□□□□ -0.59
CLN6-212ENST00000636020 AKR1C8PQ5T2L2 129 aa11.37□□□□□ -0.59
CLN6-212ENST00000636020 LCE2AQ5TA79 106 aaPredicted RBP11.37□□□□□ -0.59
CLN6-212ENST00000636020 OR10G7Q8NGN6 311 aa11.37□□□□□ -0.59
CLN6-212ENST00000636020 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
CLN6-212ENST00000636020 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
CLN6-212ENST00000636020 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
CLN6-212ENST00000636020 JPT2Q9H910 190 aa11.36□□□□□ -0.59
CLN6-212ENST00000636020 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 MBP02144 154 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 FHITP49789 147 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
CLN6-212ENST00000636020 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 MIAQ16674 131 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 PIK3CD-AS1Q5SR53 167 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 SPINK6Q6UWN8 80 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
CLN6-212ENST00000636020 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
CLN6-212ENST00000636020 UBE2L3P68036 154 aaKnown RBP11.34□□□□□ -0.59
CLN6-212ENST00000636020 TMEM75Q8N9X5 138 aa11.34□□□□□ -0.59
CLN6-212ENST00000636020 FAM213BQ8TBF2 198 aa11.34□□□□□ -0.59
CLN6-212ENST00000636020 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
CLN6-212ENST00000636020 RAB14P61106 215 aa11.33□□□□□ -0.6
CLN6-212ENST00000636020 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
CLN6-212ENST00000636020 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
CLN6-212ENST00000636020 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
CLN6-212ENST00000636020 GTSF1Q8WW33 167 aa11.33□□□□□ -0.6
CLN6-212ENST00000636020 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
CLN6-212ENST00000636020 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
CLN6-212ENST00000636020 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
CLN6-212ENST00000636020 SLPIP03973 132 aa11.31□□□□□ -0.6
CLN6-212ENST00000636020 CDC34P49427 236 aaPredicted RBP11.31□□□□□ -0.6
CLN6-212ENST00000636020 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLN6-212ENST00000636020 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
CLN6-212ENST00000636020 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
CLN6-212ENST00000636020 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
CLN6-212ENST00000636020 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
CLN6-212ENST00000636020 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
CLN6-212ENST00000636020 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 RHODO00212 210 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLN6-212ENST00000636020 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 UBE2D3P61077 147 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 UBE2D2P62837 147 aa11.29□□□□□ -0.6
CLN6-212ENST00000636020 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms