RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
LINC00339-208ENST00000634934 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
LINC00339-208ENST00000634934 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
LINC00339-208ENST00000634934 KLLNB2CW77 178 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 INSP01308 110 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 DNAH9Q9NYC9 4486 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 TRAV12-3A0A0B4J271 114 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 C7orf71A4D174 169 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 CRIP1P50238 77 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 AP5S1Q9NUS5 200 aa10.53□□□□□ -0.72
LINC00339-208ENST00000634934 COL7A1Q02388 2944 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 STPG4Q8N801 248 aa10.52□□□□□ -0.73
LINC00339-208ENST00000634934 HSBP1L1C9JCN9 74 aa10.51□□□□□ -0.73
LINC00339-208ENST00000634934 ARMS2P0C7Q2 107 aa10.51□□□□□ -0.73
LINC00339-208ENST00000634934 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-208ENST00000634934 Q6ZQT7 251 aa10.51□□□□□ -0.73
LINC00339-208ENST00000634934 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
LINC00339-208ENST00000634934 RBMY1A1P0DJD3 496 aaKnown RBP10.5□□□□□ -0.73
LINC00339-208ENST00000634934 RBMY1CP0DJD4 496 aa10.5□□□□□ -0.73
LINC00339-208ENST00000634934 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
LINC00339-208ENST00000634934 FAM104BQ5XKR9 115 aa10.5□□□□□ -0.73
LINC00339-208ENST00000634934 CSNK1G2-AS1Q8NCQ2 148 aa10.5□□□□□ -0.73
LINC00339-208ENST00000634934 LINC01587Q99440 93 aa10.5□□□□□ -0.73
LINC00339-208ENST00000634934 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 TMEM189A5PLL7 270 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 PPBPP02775 128 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 HTN1P15515 57 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
LINC00339-208ENST00000634934 G0S2P27469 103 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 RETNQ9HD89 108 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 FABP5P3A8MUU1 101 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 SPRY2O43597 315 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 SH2D1AO60880 128 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 MUC21Q5SSG8 566 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 FA2HQ7L5A8 372 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 RNF183Q96D59 192 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 B9D2Q9BPU9 175 aa10.48□□□□□ -0.73
LINC00339-208ENST00000634934 ORM1P02763 201 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 PRM2P04554 102 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 NPSP0C0P6 89 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 MAJINQ3KP22 176 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 ATOH7Q8N100 152 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 OR11H2Q8NH07 326 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 SPATA25Q9BR10 227 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 OVOL2Q9BRP0 275 aa10.46□□□□□ -0.74
LINC00339-208ENST00000634934 IGHV1OR15-1A0A075B7D0 117 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 COX8AP10176 69 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 BATFQ16520 125 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 ANXA2RQ3ZCQ2 193 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 LYZL1Q6UWQ5 148 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 TP53TG1Q9Y2A0 90 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
LINC00339-208ENST00000634934 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
LINC00339-208ENST00000634934 CBY3A6NI87 242 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 LINC00173Q6ZV60 143 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 PRSS3P2Q8NHM4 247 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 ZMAT4Q9H898 229 aa10.44□□□□□ -0.74
LINC00339-208ENST00000634934 TMSB15BA0A087X1C1 80 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 A0A096LNJ9 63 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 SIVA1O15304 175 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 FER1L6-AS1Q8NA97 138 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 X6R8D5 127 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 HBDP02042 147 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 AZU1P20160 251 aa10.43□□□□□ -0.74
LINC00339-208ENST00000634934 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
LINC00339-208ENST00000634934 IGKV3D-20A0A0C4DH25 116 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 K7EP13 123 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 GNRH2O43555 120 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-208ENST00000634934 BVES-AS1Q5T3Y7 98 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 ZNF575Q86XF7 245 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 LINC00467Q9BRT7 94 aa10.42□□□□□ -0.74
LINC00339-208ENST00000634934 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
LINC00339-208ENST00000634934 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
LINC00339-208ENST00000634934 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
LINC00339-208ENST00000634934 D6R8Y8 96 aa10.41□□□□□ -0.74
LINC00339-208ENST00000634934 SEC11AP67812 179 aa10.41□□□□□ -0.74
LINC00339-208ENST00000634934 TRGV11A0A075B6L2 103 aa10.4□□□□□ -0.74
LINC00339-208ENST00000634934 IGHV4-28A0A0C4DH34 117 aa10.4□□□□□ -0.74
LINC00339-208ENST00000634934 DEFB4AO15263 64 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms