RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ZNF56Q15929 161 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 MRPL51Q4U2R6 128 aaKnown RBP1.92□□□□□ -2.1
CNOT1-223ENST00000628857 SPANXN1Q5VSR9 72 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 C16orf47Q6ZP98 133 aaPredicted RBP1.92□□□□□ -2.1
CNOT1-223ENST00000628857 FAM104AQ969W3 186 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 CAMK2N2Q96S95 79 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 NABP2Q9BQ15 211 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 SLC50A1Q9BRV3 221 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 DYNLRB1Q9NP97 96 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 DEC1Q9P2X7 70 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 PHLDA3Q9Y5J5 127 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 PTPRMP28827 1452 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 GBF1Q92538 1859 aa1.92□□□□□ -2.1
CNOT1-223ENST00000628857 KIF21BO75037 1637 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 LTBP1Q14766 1721 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 ANKRD36A6QL64 1941 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 LCTP09848 1927 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 CPAMD8Q8IZJ3 1885 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 E9PCH4 1651 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 TRAV3A0A0B4J244 114 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV5-51A0A0C4DH38 117 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 TCRBV4S1A1TA0A5B7 111 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 H3BMM0 161 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 K7ERS5 55 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 FXYD1O00168 92 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 IGHV3-11P01762 117 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 IL4P05112 153 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 NPPCP23582 126 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 FXYD7P58549 80 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 Q1T7F1 81 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 ESRGQ1W209 222 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 SLC48A1Q6P1K1 146 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 LINC00269Q8N2A0 174 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 CCL4L1Q8NHW4 92 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 DYNLRB2Q8TF09 96 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 UBE2WQ96B02 151 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 B9D2Q9BPU9 175 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 SMIM7Q9BQ49 75 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 PLA2G12AQ9BZM1 189 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 CYSTM1Q9H1C7 97 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 TET2Q6N021 2002 aaPredicted RBP1.91□□□□□ -2.1
CNOT1-223ENST00000628857 SCN3AQ9NY46 2000 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.91□□□□□ -2.1
CNOT1-223ENST00000628857 PHRF1Q9P1Y6 1649 aaKnown RBP1.91□□□□□ -2.1
CNOT1-223ENST00000628857 CPS1P31327 1500 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 TULP4Q9NRJ4 1543 aa1.91□□□□□ -2.1
CNOT1-223ENST00000628857 MYO16Q9Y6X6 1858 aa1.9□□□□□ -2.1
CNOT1-223ENST00000628857 RREB1Q92766 1687 aa1.9□□□□□ -2.1
CNOT1-223ENST00000628857 MRC1P22897 1456 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 KIAA1549LQ6ZVL6 1849 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 IGKV1D-17A0A075B6S4 117 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-72A0A0B4J1Y9 119 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 TRAV13-2A0A0B4J235 113 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV1OR15-9A0A0B4J2B8 117 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 LOC107984156A0A0G2JMH3 177 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 A0A0J9YXY3 114 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 A6NIN4 97 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 BCE1O60756 84 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 PRH1P02810 166 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 DSCR4P56555 118 aaPredicted RBP1.9□□□□□ -2.11
CNOT1-223ENST00000628857 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 CASC10Q5T4H9 136 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 SMIM4Q8WVI0 70 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 PPP1R1CQ8WVI7 109 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 NMES1Q9C002 83 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 GABARAPL1Q9H0R8 117 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
CNOT1-223ENST00000628857 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 UBR3Q6ZT12 1888 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 PLXNB1O43157 2135 aa1.9□□□□□ -2.11
CNOT1-223ENST00000628857 IGLV3-9A0A075B6K5 115 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 IGHV3-43A0A0B4J1X8 118 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 A0A1B0GWA3 101 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 hDV103S1A0JD37 113 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 C11orf94C9JXX5 98 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 H3BVH4 76 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 H7BZZ5 65 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 HCRTO43612 131 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 SLC25A20O43772 301 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 NPYP01303 97 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 CCL3P10147 92 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 LYPD2Q6UXB3 125 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 ZFAND2AQ8N6M9 145 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 CNEP1R1Q8N9A8 125 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 PFN4Q8NHR9 129 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 TMEM141Q96I45 108 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 Q96M85 177 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 TIMM21Q9BVV7 248 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 C11orf1Q9H5F2 150 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 NDUFA12Q9UI09 145 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 SHPRHQ149N8 1683 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 NHSQ6T4R5 1651 aa1.89□□□□□ -2.11
CNOT1-223ENST00000628857 PAPPAQ13219 1627 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms