RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 SHISA9B4DS77 424 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 HERVK_113P63121 156 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 CRIP3Q6Q6R5 217 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 MUC6Q6W4X9 2439 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 IGLV11-55A0A075B6I3 123 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 A0A096LPF7 62 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 G3V4G9 280 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 BUB3O43684 328 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 CRLF1O75462 422 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 DEFB1P60022 68 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 WDR87Q6ZQQ6 2873 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 EML5Q05BV3 1969 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 TRAV13-2A0A0B4J235 113 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 LINC01619G3V211 115 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 ODF1Q14990 250 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 CLPSL2Q6UWE3 100 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 LENEPQ9Y5L5 61 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 C10orf142B7Z368 130 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 WISP2O76076 250 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 IGHG4P01861 327 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 P0C879 139 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 FOXI1Q12951 378 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 RHOHQ15669 191 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 YPEL4Q96NS1 127 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 K7ENP7 123 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 MSMPQ1L6U9 139 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 DAND5Q8N907 189 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 SPTBN5Q9NRC6 3674 aaKnown RBP4.36□□□□□ -1.71
ERCC6-213ENST00000624341 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 LINC01620Q4KN68 170 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 TEX22C9J3V5 150 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 F5H768 121 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 TRAV26-1A0A087WT03 109 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 TRAV25A0A0B4J276 109 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 CENPVL3A0A0U1RRI6 287 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 HOXB4P17483 251 aaPredicted RBP4.36□□□□□ -1.71
ERCC6-213ENST00000624341 TP53TG3Q9ULZ0 132 aa4.36□□□□□ -1.71
ERCC6-213ENST00000624341 A0A1B0GXF2 115 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 U3KQE9 123 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 WDFY3Q8IZQ1 3526 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 CEP192Q8TEP8 1941 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 IGKV1D-37A0A075B6S9 117 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 C11orf86A6NJI1 115 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 ZNF561-AS1K7EIQ3 104 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 CRYGCP07315 174 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 BAALCQ8WXS3 180 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 PCDH15Q96QU1 1955 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 SRSF2Q01130 221 aaKnown RBP4.35□□□□□ -1.71
ERCC6-213ENST00000624341 RBMY1FQ15415 496 aaKnown RBP4.35□□□□□ -1.71
ERCC6-213ENST00000624341 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 CHD7Q9P2D1 2997 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 CTRLP40313 264 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 XCL1P47992 114 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 BLCAPP62952 87 aa4.35□□□□□ -1.71
ERCC6-213ENST00000624341 KLK5Q9Y337 293 aaPredicted RBP4.35□□□□□ -1.71
ERCC6-213ENST00000624341 WI2-2373I1.2A0A1W2PRP0 233 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 E9PLD3 99 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 PRB1P04280 392 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 UBE2BP63146 152 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 DEFB136Q30KP8 78 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 NPBQ8NG41 125 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 AJUBAQ96IF1 538 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 ICOSQ9Y6W8 199 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 MYO9AB2RTY4 2548 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 TNRC6AQ8NDV7 1962 aaKnown RBP4.34□□□□□ -1.71
ERCC6-213ENST00000624341 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 IGLV1-47P01700 117 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 GATA3P23771 443 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.71
ERCC6-213ENST00000624341 COL5A1P20908 1838 aaPredicted RBP4.34□□□□□ -1.71
ERCC6-213ENST00000624341 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 ANGP03950 147 aaKnown RBP4.34□□□□□ -1.71
ERCC6-213ENST00000624341 ZNF80P51504 273 aaPredicted RBP4.34□□□□□ -1.71
ERCC6-213ENST00000624341 APOC4P55056 127 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 DAD1P61803 113 aa4.34□□□□□ -1.71
ERCC6-213ENST00000624341 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.72
ERCC6-213ENST00000624341 Q8N9W7 124 aa4.34□□□□□ -1.72
ERCC6-213ENST00000624341 NDUFS5O43920 106 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 SP5Q6BEB4 398 aaPredicted RBP4.33□□□□□ -1.72
ERCC6-213ENST00000624341 C1orf229Q6ZS94 237 aaPredicted RBP4.33□□□□□ -1.72
ERCC6-213ENST00000624341 CLEC2BQ92478 149 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
ERCC6-213ENST00000624341 SPANXDQ9BXN6 97 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 SEM1Q6ZVN7 128 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 SLC25A29Q8N8R3 303 aa4.33□□□□□ -1.72
ERCC6-213ENST00000624341 TANC2Q9HCD6 1990 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms