RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 FUSP35637 526 aaKnown RBP eCLIP14.12□□□□□ -0.15
PCDHB4-202ENST00000623478 LINC01556Q5JQF7 62 aa14.12□□□□□ -0.15
PCDHB4-202ENST00000623478 LELP1Q5T871 98 aa14.12□□□□□ -0.15
PCDHB4-202ENST00000623478 DERL1Q9BUN8 251 aa14.12□□□□□ -0.15
PCDHB4-202ENST00000623478 MANBALQ9NQG1 85 aa14.12□□□□□ -0.15
PCDHB4-202ENST00000623478 RPL35P42766 123 aaKnown RBP14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 RAB5CP51148 216 aa14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 ERVFC1-1P60608 527 aa14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 EIF5AL1Q6IS14 154 aaKnown RBP14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 ZFP82Q8N141 532 aa14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 C10orf126Q8N4M7 172 aa14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 SFRP2Q96HF1 295 aa14.11□□□□□ -0.15
PCDHB4-202ENST00000623478 RHODO00212 210 aa14.1□□□□□ -0.15
PCDHB4-202ENST00000623478 C1QBP02746 253 aa14.1□□□□□ -0.15
PCDHB4-202ENST00000623478 SULT1A2P50226 295 aa14.1□□□□□ -0.15
PCDHB4-202ENST00000623478 PRR27Q6MZM9 219 aa14.1□□□□□ -0.15
PCDHB4-202ENST00000623478 AKAP14Q86UN6 197 aa14.1□□□□□ -0.15
PCDHB4-202ENST00000623478 CDK2AP2O75956 126 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 IGHV3-30P01768 117 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 IGHV3-30-3P0DP02 117 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 IGHV3-30-5P0DP03 117 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
PCDHB4-202ENST00000623478 A0A087WTM6 91 aa14.08□□□□□ -0.16
PCDHB4-202ENST00000623478 SLC51BQ86UW2 128 aa14.08□□□□□ -0.16
PCDHB4-202ENST00000623478 Q8N3U1 123 aa14.08□□□□□ -0.16
PCDHB4-202ENST00000623478 OR10AG1Q8NH19 301 aa14.08□□□□□ -0.16
PCDHB4-202ENST00000623478 EREGO14944 169 aa14.06□□□□□ -0.16
PCDHB4-202ENST00000623478 CENPWQ5EE01 88 aa14.06□□□□□ -0.16
PCDHB4-202ENST00000623478 MUC21A0A0G2JKD1 596 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 MUC21A0A140T8X8 626 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 IBA57-AS1B1ANH7 110 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 TEX46H3BTG2 121 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 CXCL1P09341 107 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 KRTAP4-5Q9BYR2 181 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 Q9HAA7 133 aa14.05□□□□□ -0.16
PCDHB4-202ENST00000623478 MEF2BQ02080 365 aaPredicted RBP14.04□□□□□ -0.16
PCDHB4-202ENST00000623478 C9orf62Q8N4C0 152 aa14.04□□□□□ -0.16
PCDHB4-202ENST00000623478 RAB19A4D1S5 217 aa14.03□□□□□ -0.16
PCDHB4-202ENST00000623478 SNAI2O43623 268 aa14.03□□□□□ -0.16
PCDHB4-202ENST00000623478 IGLV2-8P01709 118 aa14.03□□□□□ -0.16
PCDHB4-202ENST00000623478 PGPEP1Q9NXJ5 209 aa14.03□□□□□ -0.16
PCDHB4-202ENST00000623478 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
PCDHB4-202ENST00000623478 BCL2P10415 239 aa14.02□□□□□ -0.17
PCDHB4-202ENST00000623478 SSTP61278 116 aa14.02□□□□□ -0.17
PCDHB4-202ENST00000623478 SSBP4Q9BWG4 385 aaPredicted RBP14.02□□□□□ -0.17
PCDHB4-202ENST00000623478 PSCAO43653 123 aa14.01□□□□□ -0.17
PCDHB4-202ENST00000623478 IFNA1P01562 189 aa14.01□□□□□ -0.17
PCDHB4-202ENST00000623478 OR5AL1P0C617 328 aa14.01□□□□□ -0.17
PCDHB4-202ENST00000623478 MAPKAPK5-AS1Q8N8E1 139 aa14.01□□□□□ -0.17
PCDHB4-202ENST00000623478 A0A087WWC5 75 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 PDE6DO43924 150 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 GZMBP10144 247 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 GNG4P50150 75 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 SPANXN1Q5VSR9 72 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 CDPF1Q6NVV7 123 aa14□□□□□ -0.17
PCDHB4-202ENST00000623478 TRBV20OR9-2A0A075B6H5 130 aa13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 ZNF56Q15929 161 aa13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 DAZ4Q86SG3 579 aaKnown RBP13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 DAZ3Q9NR90 486 aaKnown RBP13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 MED9Q9NWA0 146 aa13.99□□□□□ -0.17
PCDHB4-202ENST00000623478 LRCOL1A6NCL2 159 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 RAB4BP61018 213 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 UBE2D3P61077 147 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 UBE2D2P62837 147 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 LAGE3Q14657 143 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 VAX2Q9UIW0 290 aa13.98□□□□□ -0.17
PCDHB4-202ENST00000623478 TRBV7-3A0A075B6L6 115 aa13.97□□□□□ -0.17
PCDHB4-202ENST00000623478 C19orf71A6NCJ1 209 aa13.97□□□□□ -0.17
PCDHB4-202ENST00000623478 RBFOX3A6NFN3 312 aa13.97□□□□□ -0.17
PCDHB4-202ENST00000623478 OR2D3Q8NGH3 330 aa13.97□□□□□ -0.17
PCDHB4-202ENST00000623478 TPPP3Q9BW30 176 aa13.97□□□□□ -0.17
PCDHB4-202ENST00000623478 ALKAL2Q6UX46 152 aa13.96□□□□□ -0.17
PCDHB4-202ENST00000623478 NEXN-AS1Q8NBZ9 246 aa13.96□□□□□ -0.17
PCDHB4-202ENST00000623478 OR10G8Q8NGN5 311 aa13.96□□□□□ -0.17
PCDHB4-202ENST00000623478 DAZAP1Q96EP5 407 aaKnown RBP13.96□□□□□ -0.17
PCDHB4-202ENST00000623478 IGLC6P0CF74 106 aa13.95□□□□□ -0.18
PCDHB4-202ENST00000623478 KRTAP10-1P60331 282 aa13.95□□□□□ -0.18
PCDHB4-202ENST00000623478 NIT1Q86X76 327 aa13.95□□□□□ -0.18
PCDHB4-202ENST00000623478 SMIM12Q96EX1 92 aa13.95□□□□□ -0.18
PCDHB4-202ENST00000623478 KIF25-AS1Q9Y6Z4 181 aa13.95□□□□□ -0.18
PCDHB4-202ENST00000623478 F5H697 171 aa13.94□□□□□ -0.18
PCDHB4-202ENST00000623478 FER1L6-AS1Q8NA97 138 aa13.94□□□□□ -0.18
PCDHB4-202ENST00000623478 AP1S3Q96PC3 154 aa13.94□□□□□ -0.18
PCDHB4-202ENST00000623478 FAT1Q14517 4588 aa13.93□□□□□ -0.18
PCDHB4-202ENST00000623478 P01737 135 aa13.93□□□□□ -0.18
PCDHB4-202ENST00000623478 RPS20P60866 119 aaKnown RBP13.93□□□□□ -0.18
PCDHB4-202ENST00000623478 DNAJC30Q96LL9 226 aa13.93□□□□□ -0.18
PCDHB4-202ENST00000623478 URGCP-MRPS24S4R325 110 aa13.93□□□□□ -0.18
PCDHB4-202ENST00000623478 TRAV8-3A0A0A6YYJ7 113 aa13.92□□□□□ -0.18
PCDHB4-202ENST00000623478 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
PCDHB4-202ENST00000623478 TAGLN2P37802 199 aaKnown RBP13.92□□□□□ -0.18
PCDHB4-202ENST00000623478 NKX2-5P52952 324 aaPredicted RBP13.92□□□□□ -0.18
PCDHB4-202ENST00000623478 Q8N1X5 172 aa13.92□□□□□ -0.18
PCDHB4-202ENST00000623478 WFDC2Q14508 124 aa13.91□□□□□ -0.18
PCDHB4-202ENST00000623478 Q8N814 137 aa13.91□□□□□ -0.18
PCDHB4-202ENST00000623478 TM2D2Q9BX73 214 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms