RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 MLST8Q9BVC4 326 aa8.45□□□□□ -1.06
CBWD3-218ENST00000622755 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
CBWD3-218ENST00000622755 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
CBWD3-218ENST00000622755 A0A087WWC5 75 aa8.44□□□□□ -1.06
CBWD3-218ENST00000622755 CRYGDP07320 174 aa8.44□□□□□ -1.06
CBWD3-218ENST00000622755 LELP1Q5T871 98 aa8.44□□□□□ -1.06
CBWD3-218ENST00000622755 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
CBWD3-218ENST00000622755 SFRP2Q96HF1 295 aa8.44□□□□□ -1.06
CBWD3-218ENST00000622755 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 P01737 135 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
CBWD3-218ENST00000622755 GAGE1Q13065 139 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 GAGE4Q13068 117 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 GAGE5Q13069 117 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 ZNF56Q15929 161 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 GAGE13Q4V321 117 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 KCNIP4Q6PIL6 250 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
CBWD3-218ENST00000622755 SCRT2Q9NQ03 307 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 URGCP-MRPS24S4R325 110 aa8.43□□□□□ -1.06
CBWD3-218ENST00000622755 A0A087WWL8 130 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 TRBV10-1A0A0K0K1A3 114 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 PSCAO43653 123 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 OR5AL1P0C617 328 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 RPL19P84098 196 aaKnown RBP8.42□□□□□ -1.06
CBWD3-218ENST00000622755 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 TPPP3Q9BW30 176 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
CBWD3-218ENST00000622755 F5H697 171 aa8.41□□□□□ -1.06
CBWD3-218ENST00000622755 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
CBWD3-218ENST00000622755 AP1S3Q96PC3 154 aa8.41□□□□□ -1.06
CBWD3-218ENST00000622755 JPT2Q9H910 190 aa8.41□□□□□ -1.06
CBWD3-218ENST00000622755 SNAI2O43623 268 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 RAB4BP61018 213 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 TOR2AQ5JU69 321 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 FER1L6-AS1Q8NA97 138 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
CBWD3-218ENST00000622755 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 F2Z2F3 143 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 SSTP61278 116 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 CACNG7P62955 275 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
CBWD3-218ENST00000622755 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
CBWD3-218ENST00000622755 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
CBWD3-218ENST00000622755 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
CBWD3-218ENST00000622755 H7C1H1 209 aa8.38□□□□□ -1.07
CBWD3-218ENST00000622755 UFSP1Q6NVU6 142 aa8.38□□□□□ -1.07
CBWD3-218ENST00000622755 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
CBWD3-218ENST00000622755 C14orf178Q8N769 122 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-218ENST00000622755 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-218ENST00000622755 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 IGHV3-30-3P0DP02 117 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 CEBPGP53567 150 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 Q6ZSN1 163 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 A0A087WX48 190 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 PKIAP61925 76 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 LAGE3Q14657 143 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 ELOBQ15370 118 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
CBWD3-218ENST00000622755 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 MUC21A0A0G2JKD1 596 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 MUC21A0A140T8X8 626 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 MGPP08493 103 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 NKX2-5P52952 324 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-218ENST00000622755 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 RMI2Q96E14 147 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 Q9HAA7 133 aa8.36□□□□□ -1.07
CBWD3-218ENST00000622755 IGLV2-8P01709 118 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
CBWD3-218ENST00000622755 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
CBWD3-218ENST00000622755 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
CBWD3-218ENST00000622755 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 GZMBP10144 247 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-218ENST00000622755 NUDT10Q8NFP7 164 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 OR10G8Q8NGN5 311 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
CBWD3-218ENST00000622755 CHCHD7Q9BUK0 85 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms