RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KIR2DL5AQ8N109 375 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 FREM2Q5SZK8 3169 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 IQCJQ1A5X6 159 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 MDFICQ9P1T7 246 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 TACC2O95359 2948 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 LAGE3Q14657 143 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 GDF5OSQ5U4N7 250 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 MDFIQ99750 246 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 C20orf144Q9BQM9 153 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 KLK12Q9UKR0 248 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 SEC11AP67812 179 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 EIF4EBP1Q13541 118 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-229ENST00000622668 SPATA3Q8NHX4 192 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-229ENST00000622668 I3L3M4 83 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 TYMSP04818 313 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 XCL1P47992 114 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 ODF3L2Q3SX64 289 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 ARL6IP6Q8N6S5 226 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 LYRM9A8MSI8 78 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 HBDP02042 147 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 IGLC2P0DOY2 106 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
HDAC9-229ENST00000622668 DMXL1Q9Y485 3027 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 A0A087WWC5 75 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
HDAC9-229ENST00000622668 PMCHL2Q9BQD1 86 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 BOD1L1Q8NFC6 3051 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 K7EQD1 137 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 TNFRSF6BO95407 300 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 VSIG2Q96IQ7 327 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 LY96Q9Y6Y9 160 aa6.78□□□□□ -1.32
HDAC9-229ENST00000622668 PAM16Q9Y3D7 125 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 TRAV2A0A0B4J234 112 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 LINC00614P0C842 121 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 ATOH7Q8N100 152 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 TRAV9-1A0A075B6T8 112 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 A0A087X0K7 114 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 PRSS46E5RG02 174 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 IFITM2Q01629 132 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
HDAC9-229ENST00000622668 Q6ZWC4 215 aa6.77□□□□□ -1.33
HDAC9-229ENST00000622668 RAB37Q96AX2 223 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 ZNF503Q96F45 646 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 C5orf52A6NGY3 159 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 NHLRC4P0CG21 123 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-229ENST00000622668 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 TP53TG1Q9Y2A0 90 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 KIR3DS1Q14943 382 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 CITED1Q99966 193 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 ZZEF1O43149 2961 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
HDAC9-229ENST00000622668 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-229ENST00000622668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-229ENST00000622668 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-229ENST00000622668 PRM2P04554 102 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 PRIMA1Q86XR5 153 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 TP53TG3Q9ULZ0 132 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 KALRNO60229 2985 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 LTAP01374 205 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 JPT2Q9H910 190 aa6.75□□□□□ -1.33
HDAC9-229ENST00000622668 A0A096LNT2 108 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 FSHBP01225 129 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 KPRPQ5T749 579 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-229ENST00000622668 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 UBE2BP63146 152 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 RASL10AQ92737 203 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
HDAC9-229ENST00000622668 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 PRSS29PA6NIE9 313 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 CRIP2P52943 208 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-229ENST00000622668 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 Q8N2B8 174 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 MSRB1Q9NZV6 116 aa6.74□□□□□ -1.33
HDAC9-229ENST00000622668 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
HDAC9-229ENST00000622668 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 C10orf126Q8N4M7 172 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 GNB1LQ9BYB4 327 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 TTC32Q5I0X7 151 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 NIT1Q86X76 327 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 ZNF479Q96JC4 524 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
HDAC9-229ENST00000622668 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms