RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 PRORYQ9H606 182 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 PCNX1Q96RV3 2341 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 PKDREJQ9NTG1 2253 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 ARFGEF3Q5TH69 2177 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 LYZL6O75951 148 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 CNTFRP26992 372 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 TOMM6Q96B49 74 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 ITPR1Q14643 2758 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 TRBV30A0A0K0K1B3 111 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 TRIAP1O43715 76 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 ZNF843Q8N446 348 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 CNEP1R1Q8N9A8 125 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 Q8TAT8 98 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 TPSG1Q9NRR2 321 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 ZNRD1Q9P1U0 126 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 IGSF10Q6WRI0 2623 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 PRB1P04280 392 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 CRYGDP07320 174 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 NRACQ8N912 160 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 SHANK2-AS3Q9BTD1 123 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 CNFNQ9BYD5 112 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 A0A0G2JNJ9 132 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 CCL21O00585 134 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
VPS11-209ENST00000622309 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 Q5XG85 94 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 Q9UFV3 132 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 PLCE1Q9P212 2302 aa6.06□□□□□ -1.44
VPS11-209ENST00000622309 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
VPS11-209ENST00000622309 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 TRGV3P03979 118 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 VMA21Q3ZAQ7 101 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 MUSTN1Q8IVN3 82 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 EEF1AKMT3Q96AZ1 226 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 TTTY12Q9BZ98 90 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 ATMQ13315 3056 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 ZGRF1Q86YA3 2104 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 NAV3Q8IVL0 2385 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 C17orf100A8MU93 164 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 CGB3P0DN86 165 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 CGB7P0DN87 165 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 ERCC8Q13216 396 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 C16orf92Q96LL3 132 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 PYGO1Q9Y3Y4 419 aa6.05□□□□□ -1.44
VPS11-209ENST00000622309 HELZ2Q9BYK8 2649 aaKnown RBP6.05□□□□□ -1.44
VPS11-209ENST00000622309 CXCL5P42830 114 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 KLRB1Q12918 225 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 DMXL2Q8TDJ6 3036 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 PIEZO2Q9H5I5 2752 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 J3QQQ9 107 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 INAFM2P0DMQ5 153 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 C14orf178Q8N769 122 aaPredicted RBP6.04□□□□□ -1.44
VPS11-209ENST00000622309 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 SRRM5B3KS81 715 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 H3BRN7 92 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 FAM19A4Q96LR4 140 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 ICOSQ9Y6W8 199 aa6.04□□□□□ -1.44
VPS11-209ENST00000622309 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
VPS11-209ENST00000622309 PDE6HQ13956 83 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 C10orf105Q8TEF2 133 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 MAST4O15021 2626 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 A0A087WWL8 130 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 EIF4EBP3O60516 100 aaPredicted RBP6.03□□□□□ -1.44
VPS11-209ENST00000622309 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 CLEC2BQ92478 149 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 PFN2P35080 140 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 SUMO2P61956 95 aaKnown RBP6.03□□□□□ -1.44
VPS11-209ENST00000622309 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
VPS11-209ENST00000622309 NBASA2RRP1 2371 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 PRSS2P07478 247 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 ZNF833PQ6ZTB9 187 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 CYSRT1A8MQ03 144 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 UBE2E1P51965 193 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 RHOHQ15669 191 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 NSUN5P1Q3KNT7 163 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 C5orf38Q86SI9 138 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
VPS11-209ENST00000622309 TMEM223A0PJW6 202 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 CCL8P80075 99 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 SPTA1P02549 2419 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 ACACAQ13085 2346 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 DEFB108BQ8NET1 73 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 AGPAT4-IT1Q9H0P7 198 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 U3KQE9 123 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 TMEM30BQ3MIR4 351 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 FAM216BQ8N7L0 139 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 SLC50A1Q9BRV3 221 aa6.01□□□□□ -1.45
VPS11-209ENST00000622309 ADGRG4Q8IZF6 3080 aa6□□□□□ -1.45
VPS11-209ENST00000622309 COL27A1Q8IZC6 1860 aaPredicted RBP6□□□□□ -1.45
VPS11-209ENST00000622309 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
VPS11-209ENST00000622309 TMEM178BH3BS89 294 aa6□□□□□ -1.45
VPS11-209ENST00000622309 LST1O00453 97 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms