RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SPANXB1Q9NS25 103 aaPredicted RBP7.71□□□□□ -1.17
COL4A6-210ENST00000621266 SCXQ7RTU7 201 aa7.71□□□□□ -1.18
COL4A6-210ENST00000621266 E9PLD3 99 aa7.71□□□□□ -1.18
COL4A6-210ENST00000621266 IGLV2-23P01705 113 aa7.71□□□□□ -1.18
COL4A6-210ENST00000621266 IGKV4-1P06312 121 aa7.71□□□□□ -1.18
COL4A6-210ENST00000621266 GTSF1Q8WW33 167 aa7.71□□□□□ -1.18
COL4A6-210ENST00000621266 PKDREJQ9NTG1 2253 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 NPBQ8NG41 125 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 UBE2E1P51965 193 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV7-4-1A0A0J9YVY3 117 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 CCDC179H3BU77 68 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 CAMK2N2Q96S95 79 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 TMEM256-PLSCR3K7ERE1 68 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 LMO1P25800 156 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 SEM1Q6ZVN7 128 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
COL4A6-210ENST00000621266 TNRC6BQ9UPQ9 1833 aaKnown RBP7.69□□□□□ -1.18
COL4A6-210ENST00000621266 M0QXV9 152 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 ENHOQ6UWT2 76 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 HELZP42694 1942 aaKnown RBP7.69□□□□□ -1.18
COL4A6-210ENST00000621266 CXCL5P42830 114 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 RMI2Q96E14 147 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 IL15RAQ13261 267 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 RBX1P62877 108 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 Q8TCH9 128 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 C15orf65H3BRN8 121 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 GATA3P23771 443 aa7.69□□□□□ -1.18
COL4A6-210ENST00000621266 ODF1Q14990 250 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 ZNF503Q96F45 646 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 TIRAPP58753 221 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 NFE4Q86UQ8 179 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 C16orf54Q6UWD8 224 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 DOPEY2Q9Y3R5 2298 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV1-69P01742 117 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 HIST2H2BDQ6DRA6 164 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 C2orf16Q68DN1 1984 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 COL4A3Q01955 1670 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 COX7A2LO14548 114 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 NDUFA7O95182 113 aa7.68□□□□□ -1.18
COL4A6-210ENST00000621266 H3BQ85 93 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
COL4A6-210ENST00000621266 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
COL4A6-210ENST00000621266 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
COL4A6-210ENST00000621266 USF3Q68DE3 2245 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 TIMM17BO60830 172 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV3-30P01768 117 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV3-33P01772 117 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV4-59P01825 116 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV3-30-3P0DP02 117 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV3-30-5P0DP03 117 aa7.67□□□□□ -1.18
COL4A6-210ENST00000621266 DKK4Q9UBT3 224 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 ANAPC1Q9H1A4 1944 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 ZNF407Q9C0G0 2248 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 IGLV3-9A0A075B6K5 115 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 K7EQD1 137 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 BPY2O14599 106 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 A6NED7 52 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 PRORYQ9H606 182 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 FAM215AQ9Y5M1 114 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 APOC4P55056 127 aa7.66□□□□□ -1.18
COL4A6-210ENST00000621266 HRCT1Q6UXD1 115 aa7.65□□□□□ -1.18
COL4A6-210ENST00000621266 PIFOQ8TCI5 191 aa7.65□□□□□ -1.18
COL4A6-210ENST00000621266 IGLV1-44P01699 117 aa7.65□□□□□ -1.18
COL4A6-210ENST00000621266 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
COL4A6-210ENST00000621266 IGHV4-30-2A0A087WSY4 118 aa7.65□□□□□ -1.19
COL4A6-210ENST00000621266 A0A0J9YWU9 116 aa7.65□□□□□ -1.19
COL4A6-210ENST00000621266 GP9P14770 177 aa7.65□□□□□ -1.19
COL4A6-210ENST00000621266 LOXP28300 417 aaPredicted RBP7.65□□□□□ -1.19
COL4A6-210ENST00000621266 GYPEP15421 78 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 ZNF524Q96C55 264 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 ZNF503-AS2A6NEH8 195 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 TEX22C9J3V5 150 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 SLPIP03973 132 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 FGF23Q9GZV9 251 aaPredicted RBP7.64□□□□□ -1.19
COL4A6-210ENST00000621266 MRPL36Q9P0J6 103 aaKnown RBP7.64□□□□□ -1.19
COL4A6-210ENST00000621266 TTC28Q96AY4 2481 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 UBE2AP49459 152 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 CASC2Q6XLA1 102 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
COL4A6-210ENST00000621266 ADORA2A-AS1P86434 159 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 RETNQ9HD89 108 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 ELANEP08246 267 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 DEFB112Q30KQ8 113 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 ESM1Q9NQ30 184 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 C2orf70A6NJV1 201 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 J3QLI3 93 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 MIAQ16674 131 aa7.63□□□□□ -1.19
COL4A6-210ENST00000621266 PRR4Q16378 134 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 PLXNA2O75051 1894 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms