RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 C20orf144Q9BQM9 153 aa8.72□□□□□ -1.01
CLIP1-219ENST00000620786 HILS1P60008 231 aa8.72□□□□□ -1.01
CLIP1-219ENST00000620786 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
CLIP1-219ENST00000620786 ODF3BA8MYP8 253 aa8.71□□□□□ -1.01
CLIP1-219ENST00000620786 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.01
CLIP1-219ENST00000620786 C9orf118A6NHY6 69 aa8.71□□□□□ -1.02
CLIP1-219ENST00000620786 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
CLIP1-219ENST00000620786 E7EUB6 86 aa8.71□□□□□ -1.02
CLIP1-219ENST00000620786 K7ERJ3 54 aa8.71□□□□□ -1.02
CLIP1-219ENST00000620786 ROS1P08922 2347 aa8.71□□□□□ -1.02
CLIP1-219ENST00000620786 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 COX11Q9Y6N1 276 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 DLEU1O43261 78 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 A0A0J9YX75 114 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 ZGRF1Q86YA3 2104 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
CLIP1-219ENST00000620786 IGLC2P0DOY2 106 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 IGLC3P0DOY3 106 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 IL15RAQ13261 267 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 SND1-IT1Q9HBX3 110 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 A0A0J9YXV3 536 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 LINC01548A6NM66 108 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLIP1-219ENST00000620786 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
CLIP1-219ENST00000620786 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
CLIP1-219ENST00000620786 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 ZNF747Q9BV97 191 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 MDFICQ9P1T7 246 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 CADP27708 2225 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 PLA2G2AP14555 144 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
CLIP1-219ENST00000620786 GTF3C1Q12789 2109 aa8.68□□□□□ -1.02
CLIP1-219ENST00000620786 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 PPDPFLQ8WWR9 84 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 IGLV2-14P01704 120 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 GAGE12HA6NDE8 117 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 ZNF124Q15973 351 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 TECTAO75443 2155 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 FAM167A-AS1Q96KT0 104 aa8.67□□□□□ -1.02
CLIP1-219ENST00000620786 CCL25O15444 150 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 CFC1BP0CG36 223 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 CFC1P0CG37 223 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 SIVA1O15304 175 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 TRACP01848 142 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 CXCL5P42830 114 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 Q6ZSV7 163 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 OBSL1O75147 1896 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 C10orf91Q5T1B1 145 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
CLIP1-219ENST00000620786 C12orf74Q32Q52 190 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 EML6Q6ZMW3 1958 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 IGKV2-24A0A0C4DH68 120 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 LGALS9O00182 355 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 NDUFB1O75438 58 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
CLIP1-219ENST00000620786 F8W1H4 67 aa8.65□□□□□ -1.03
CLIP1-219ENST00000620786 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.03
CLIP1-219ENST00000620786 B9D2Q9BPU9 175 aa8.65□□□□□ -1.03
CLIP1-219ENST00000620786 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 DOCK10Q96BY6 2186 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 DENND4AQ7Z401 1863 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 K7EP34 96 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 CRYGDP07320 174 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 DEFB114Q30KQ6 69 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 PCNX2A6NKB5 2137 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 LYRM9A8MSI8 78 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 IGF1P05019 195 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 IFITM1P13164 125 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 DAND5Q8N907 189 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 MUSTN1Q8IVN3 82 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 TOMM6Q96B49 74 aa8.64□□□□□ -1.03
CLIP1-219ENST00000620786 OPRPNQ99935 248 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-219ENST00000620786 MALRD1Q5VYJ5 2156 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 Q6ZTI0 123 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 SMIM9A6NGZ8 99 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
CLIP1-219ENST00000620786 TRBV6-1A0A0K0K1D8 114 aa8.62□□□□□ -1.03
CLIP1-219ENST00000620786 ZFHX2Q9C0A1 2572 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-219ENST00000620786 H3BMG7 143 aa8.62□□□□□ -1.03
CLIP1-219ENST00000620786 RS1O15537 224 aa8.62□□□□□ -1.03
CLIP1-219ENST00000620786 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
CLIP1-219ENST00000620786 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
CLIP1-219ENST00000620786 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
CLIP1-219ENST00000620786 H0YGX0 51 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms