RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 HLA-DRB4P13762 266 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 ASIPP42127 132 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 Q1RN00 199 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 STHQ8IWL8 128 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 HLA-DRB4X5D2U9 266 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 HECTD1Q9ULT8 2610 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 KMT2BQ9UMN6 2715 aaPredicted RBP5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 NPBQ8NG41 125 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 HHLA3Q9XRX5 114 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 RBAKDNA6NC62 111 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 TRGV3P03979 118 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 CTSGP08311 255 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 PAPPA-AS1Q5QFB9 102 aa5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 SPAG8Q99932 426 aaPredicted RBP5.35□□□□□ -1.55
SRGAP3-213ENST00000618999 TRAV21A0A0B4J279 112 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 PRAC2D3DTV9 90 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 GAS8-AS1O95177 125 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 LRRC75A-AS1Q8N1F1 130 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 SYT8Q8NBV8 401 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 PRADC1Q9BSG0 188 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 DPH3P1Q9H4G8 78 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 FBN2P35556 2912 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 H3BUX3 64 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 CCL24O00175 119 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 PRYO14603 147 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 SPINK8P0C7L1 97 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 ATP5G2Q06055 141 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 C2orf66Q6UXQ4 117 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 KIR2DL4Q99706 377 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 CNFNQ9BYD5 112 aa5.34□□□□□ -1.55
SRGAP3-213ENST00000618999 ABCA2Q9BZC7 2435 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 IGKV3-7A0A075B6H7 116 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 TMEM89A2RUT3 159 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 A8MWV9 139 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 LGALS3P17931 250 aaKnown RBP5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 COX8CQ7Z4L0 72 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 MAPKAPK5-AS1Q8N8E1 139 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.56
SRGAP3-213ENST00000618999 TRAV12-1A0A0B4J245 112 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 ZNF415Q09FC8 603 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 C14orf178Q8N769 122 aaPredicted RBP5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 NDPQ00604 133 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 Q8N9W7 124 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 C1QTNF4Q9BXJ3 329 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 H7C2G1 150 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 BUB3O43684 328 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 EBI3Q14213 229 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 LINC00527Q9UJ94 153 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 TENM4Q6N022 2769 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 ACANP16112 2415 aa5.33□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHV4-31P0DP07 118 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 ID1P41134 155 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 C9orf139Q6ZV77 190 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 C20orf78Q9BR46 151 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 SMAD5-AS1Q9Y6J3 95 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 J3QLI3 93 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 Q8N6K4 173 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 AJUBAQ96IF1 538 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 APCP25054 2843 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHV7-81A0A0B4J1V7 117 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 TMEM262E9PQX1 116 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 RNASE4P34096 147 aaKnown RBP5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 PPDPFLQ8WWR9 84 aa5.32□□□□□ -1.56
SRGAP3-213ENST00000618999 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 TRBV20-1A0A075B6N2 111 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 TRBV7-1A0A0A6YYK4 115 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 ATP6V0E1O15342 81 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 FOXI1Q12951 378 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 MRPL23Q16540 153 aaKnown RBP5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 DEFB112Q30KQ8 113 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 PHLDA1Q8WV24 401 aaPredicted RBP5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 LINC00477Q96M19 166 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 OVOL1O14753 267 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 LGALS1P09382 135 aaKnown RBP5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 EMP1P54849 157 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 SVEP1Q4LDE5 3571 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 G3V318 75 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 RHODO00212 210 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 FAM159AQ6UWV7 190 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 RNF183Q96D59 192 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
SRGAP3-213ENST00000618999 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 TCTEX1D4Q5JR98 221 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 TEX29Q8N6K0 151 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 NRACQ8N912 160 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 ZANQ9Y493 2812 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 A0A096LNT2 108 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms