RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CD7P09564 240 aa15.24■□□□□ 0.03
NEK3-208ENST00000618534 TRAV12-3A0A0B4J271 114 aa15.24■□□□□ 0.03
NEK3-208ENST00000618534 APOMO95445 188 aa15.24■□□□□ 0.03
NEK3-208ENST00000618534 TSPEAR-AS2P59090 65 aa15.24■□□□□ 0.03
NEK3-208ENST00000618534 DLX4Q92988 240 aaPredicted RBP15.24■□□□□ 0.03
NEK3-208ENST00000618534 LOC107984156A0A0G2JMH3 177 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 VCYO14598 125 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 SMCPP49901 116 aaPredicted RBP15.23■□□□□ 0.03
NEK3-208ENST00000618534 PAPPA-AS1Q5QFB9 102 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 CFAP126Q5VTH2 177 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 ARL17AQ8IVW1 177 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 KIR2DL4Q99706 377 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 SDHAF1A6NFY7 115 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 SCGB1A1P11684 91 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 LY6DQ14210 128 aa15.23■□□□□ 0.03
NEK3-208ENST00000618534 NDUFS8O00217 210 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 TMEM141Q96I45 108 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 PSMB2P49721 201 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 DCANP1Q8TF63 244 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 TIMM17AQ99595 171 aa15.22■□□□□ 0.03
NEK3-208ENST00000618534 TMEM170BQ5T4T1 132 aa15.21■□□□□ 0.03
NEK3-208ENST00000618534 FAM74A4Q5TZK3 123 aa15.21■□□□□ 0.03
NEK3-208ENST00000618534 CLEC2AQ6UVW9 174 aa15.21■□□□□ 0.03
NEK3-208ENST00000618534 ZNRF2Q8NHG8 242 aa15.21■□□□□ 0.03
NEK3-208ENST00000618534 ID1P41134 155 aa15.2■□□□□ 0.02
NEK3-208ENST00000618534 NDUFA11Q86Y39 141 aa15.2■□□□□ 0.02
NEK3-208ENST00000618534 UBE2D3P61077 147 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 UBE2D2P62837 147 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 C1QTNF4Q9BXJ3 329 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 TRBV27A0A0K0K1C4 114 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 LGALS9O00182 355 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
NEK3-208ENST00000618534 ZNF256Q9Y2P7 627 aaPredicted RBP15.19■□□□□ 0.02
NEK3-208ENST00000618534 ZNF876PQ49A33 203 aa15.18■□□□□ 0.02
NEK3-208ENST00000618534 FOXI1Q12951 378 aa15.18■□□□□ 0.02
NEK3-208ENST00000618534 IGHV3-30P01768 117 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 IGHV3-30-5P0DP03 117 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 TMEM95Q3KNT9 176 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 MDFICQ9P1T7 246 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 TRAV12-2A0A075B6T6 113 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 TRBV6-5A0A0K0K1A5 114 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 IGKV3-20P01619 116 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 ZNF688P0C7X2 276 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 CFHR3Q02985 330 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 ZNF418Q8TF45 676 aaPredicted RBP15.17■□□□□ 0.02
NEK3-208ENST00000618534 C9orf85Q96MD7 179 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 AMELXQ99217 191 aa15.17■□□□□ 0.02
NEK3-208ENST00000618534 K7EMT4 169 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 NFE4Q86UQ8 179 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 SLC25A29Q8N8R3 303 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 OPRPNQ99935 248 aaPredicted RBP15.16■□□□□ 0.02
NEK3-208ENST00000618534 CFC1BP0CG36 223 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 CFC1P0CG37 223 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 ZNF56Q15929 161 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 ATP6V0E2Q8NHE4 81 aa15.16■□□□□ 0.02
NEK3-208ENST00000618534 COL12A1Q99715 3063 aa15.15■□□□□ 0.02
NEK3-208ENST00000618534 J3QQQ9 107 aa15.15■□□□□ 0.02
NEK3-208ENST00000618534 C10orf105Q8TEF2 133 aa15.15■□□□□ 0.02
NEK3-208ENST00000618534 PTH2Q96A98 100 aa15.15■□□□□ 0.02
NEK3-208ENST00000618534 M0QY20 66 aa15.14■□□□□ 0.01
NEK3-208ENST00000618534 TCL1BO95988 128 aa15.14■□□□□ 0.01
NEK3-208ENST00000618534 NCOR2Q9Y618 2525 aa15.14■□□□□ 0.01
NEK3-208ENST00000618534 Q8N1Y9 231 aa15.13■□□□□ 0.01
NEK3-208ENST00000618534 LGALS3P17931 250 aaKnown RBP15.13■□□□□ 0.01
NEK3-208ENST00000618534 LYRM7Q5U5X0 104 aa15.13■□□□□ 0.01
NEK3-208ENST00000618534 SYT8Q8NBV8 401 aa15.13■□□□□ 0.01
NEK3-208ENST00000618534 GNLYP22749 145 aa15.12■□□□□ 0.01
NEK3-208ENST00000618534 CHD8Q9HCK8 2581 aa15.12■□□□□ 0.01
NEK3-208ENST00000618534 TGFAP01135 160 aa15.12■□□□□ 0.01
NEK3-208ENST00000618534 NSUN5P1Q3KNT7 163 aa15.12■□□□□ 0.01
NEK3-208ENST00000618534 C10orf126Q8N4M7 172 aa15.12■□□□□ 0.01
NEK3-208ENST00000618534 IGHV4-30-2A0A087WSY4 118 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 A0A0J9YX75 114 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 CIDEAO60543 219 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 C10orf99Q6UWK7 81 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 CCL19Q99731 98 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 MAP1AP78559 2803 aaPredicted RBP15.11■□□□□ 0.01
NEK3-208ENST00000618534 P0DMU3 169 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 FAM231AP0DMU4 169 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 FAM231CP0DMU5 169 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 ODF3Q96PU9 254 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 CDIP1Q9H305 208 aa15.11■□□□□ 0.01
NEK3-208ENST00000618534 RHOHQ15669 191 aa15.1■□□□□ 0.01
NEK3-208ENST00000618534 SPINK13Q1W4C9 94 aa15.1■□□□□ 0.01
NEK3-208ENST00000618534 SPTBN4Q9H254 2564 aa15.1■□□□□ 0.01
NEK3-208ENST00000618534 AVPP01185 164 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 MSMBP08118 114 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 FHL3Q13643 280 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 TMEM223A0PJW6 202 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 PSMB8P28062 276 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 TRPT1Q86TN4 253 aaKnown RBP15.09■□□□□ 0.01
NEK3-208ENST00000618534 PRO1854Q9UHT4 67 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 ITPR1Q14643 2758 aa15.09■□□□□ 0.01
NEK3-208ENST00000618534 IGHV3-64A0A075B6Q5 118 aa15.08■□□□□ 0.01
NEK3-208ENST00000618534 IGHV1OR15-1A0A075B7D0 117 aa15.08■□□□□ 0.01
NEK3-208ENST00000618534 CARD19Q96LW7 228 aa15.08■□□□□ 0.01
NEK3-208ENST00000618534 LEPROTO15243 131 aa15.08■□□□□ 0
NEK3-208ENST00000618534 TRBV20-1A0A075B6N2 111 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms