RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 LINC01560Q8TB33 94 aa10.76□□□□□ -0.69
TNFRSF11A-205ENST00000616710 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
TNFRSF11A-205ENST00000616710 G3V318 75 aa10.75□□□□□ -0.69
TNFRSF11A-205ENST00000616710 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
TNFRSF11A-205ENST00000616710 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 NRACQ8N912 160 aa10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
TNFRSF11A-205ENST00000616710 SPENQ96T58 3664 aaKnown RBP10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 GATA4P43694 442 aa10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 A0A1W2PNU3 283 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 ELANEP08246 267 aa10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 UBE2D1P51668 147 aa10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
TNFRSF11A-205ENST00000616710 VCYO14598 125 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TIMM21Q9BVV7 248 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 UBE2E1P51965 193 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 UBE2D3P61077 147 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 UBE2D2P62837 147 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 ZNF580Q9UK33 172 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 DMXL1Q9Y485 3027 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TLN2Q9Y4G6 2542 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 NOTCH2Q04721 2471 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 CDX4O14627 284 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 PAX8Q06710 450 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TOMM6Q96B49 74 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TNFRSF18Q9Y5U5 241 aa10.72□□□□□ -0.69
TNFRSF11A-205ENST00000616710 INS-IGF2F8WCM5 200 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 CTSGP08311 255 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 A8MZ25 164 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TRIAP1O43715 76 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
TNFRSF11A-205ENST00000616710 IGHV3-33P01772 117 aa10.71□□□□□ -0.7
TNFRSF11A-205ENST00000616710 DKK4Q9UBT3 224 aa10.71□□□□□ -0.7
TNFRSF11A-205ENST00000616710 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.7
TNFRSF11A-205ENST00000616710 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 HOXD3P31249 432 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 ZZEF1O43149 2961 aa10.7□□□□□ -0.7
TNFRSF11A-205ENST00000616710 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF11A-205ENST00000616710 NUP37Q8NFH4 326 aa10.69□□□□□ -0.7
TNFRSF11A-205ENST00000616710 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
TNFRSF11A-205ENST00000616710 NPFFO15130 113 aa10.69□□□□□ -0.7
TNFRSF11A-205ENST00000616710 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
TNFRSF11A-205ENST00000616710 LAMA5O15230 3695 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 HERVK_113P63121 156 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 C19orf54Q5BKX5 351 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 TRAV12-2A0A075B6T6 113 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 TRBV6-1A0A0K0K1D8 114 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 USP9YO00507 2555 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGKV3D-7A0A0C4DH55 119 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 NSUN5P1Q3KNT7 163 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 SEM1Q6ZVN7 128 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 ICOSQ9Y6W8 199 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 MYO18BQ8IUG5 2567 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 OVOL3O00110 214 aa10.67□□□□□ -0.7
TNFRSF11A-205ENST00000616710 CD59P13987 128 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 hADV29S1A0JD25 119 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 LGALS9O00182 355 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 PCSK5Q92824 1860 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 BRI3O95415 125 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 PRR9Q5T870 116 aa10.66□□□□□ -0.7
TNFRSF11A-205ENST00000616710 BUB3O43684 328 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGHG3P01860 377 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 MRGPRG-AS1Q2M3A8 158 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 M0R1W7 72 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 RHOHQ15669 191 aa10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 PRR30Q53SZ7 412 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF11A-205ENST00000616710 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.71
TNFRSF11A-205ENST00000616710 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.71
TNFRSF11A-205ENST00000616710 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 FN1P02751 2386 aaKnown RBP10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGLV1-47P01700 117 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 FAM215AQ9Y5M1 114 aa10.64□□□□□ -0.71
TNFRSF11A-205ENST00000616710 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 TRACP01848 142 aa10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 TMEM126AQ9H061 195 aa10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 TINCRA0A1B0GVN0 87 aa10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
TNFRSF11A-205ENST00000616710 ASH1LQ9NR48 2969 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms