RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SHANK2-AS3Q9BTD1 123 aa6.74□□□□□ -1.33
VPS11-206ENST00000614944 E7EUB6 86 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 HERVK_113P61574 105 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 SLC25A2Q9BXI2 301 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 FBN2P35556 2912 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 ZFYVE26Q68DK2 2539 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 LGALS9O00182 355 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 LINC01561Q8N1V8 128 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 MYO18BQ8IUG5 2567 aa6.73□□□□□ -1.33
VPS11-206ENST00000614944 TRBV7-3A0A075B6L6 115 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 IGHG2P01859 326 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 RPL13AP40429 203 aaKnown RBP6.72□□□□□ -1.33
VPS11-206ENST00000614944 Q8N2B8 174 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 IFI27L1Q96BM0 104 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 IGLV11-55A0A075B6I3 123 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 PRB3Q04118 309 aaPredicted RBP6.72□□□□□ -1.33
VPS11-206ENST00000614944 ASPHD1Q5U4P2 390 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 I3L2K1 104 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 PLGLAQ15195 96 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 TENM4Q6N022 2769 aa6.72□□□□□ -1.33
VPS11-206ENST00000614944 C19orf71A6NCJ1 209 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PRR20EP86478 221 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PRR20CP86479 221 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PRR20DP86480 221 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PRR20BP86481 221 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PRR20AP86496 221 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 PMAIP1Q13794 54 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 HIST2H2BCQ6DN03 193 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 SSMEM1Q8WWF3 244 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 IGF2BP2-AS1Q96M15 143 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 DCHS2Q6V1P9 2916 aa6.71□□□□□ -1.33
VPS11-206ENST00000614944 CD164Q04900 197 aa6.71□□□□□ -1.34
VPS11-206ENST00000614944 LINC00482Q8N8I6 264 aa6.71□□□□□ -1.34
VPS11-206ENST00000614944 ARHGAP32A7KAX9 2087 aa6.71□□□□□ -1.34
VPS11-206ENST00000614944 LINC01619G3V211 115 aa6.71□□□□□ -1.34
VPS11-206ENST00000614944 DPH3P1Q9H4G8 78 aa6.71□□□□□ -1.34
VPS11-206ENST00000614944 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 PYYP10082 97 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 CFHR3Q02985 330 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 DEFB112Q30KQ8 113 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 SPINK9Q5DT21 86 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 C10orf55Q5SWW7 151 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 BRD3OSQ6XYD6 125 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 LRBAP50851 2863 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 H3BMM0 161 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 ATOX1O00244 68 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 Q71RC1 249 aaPredicted RBP6.7□□□□□ -1.34
VPS11-206ENST00000614944 UBE2WQ96B02 151 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 MGST2Q99735 147 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
VPS11-206ENST00000614944 USP9YO00507 2555 aaPredicted RBP6.7□□□□□ -1.34
VPS11-206ENST00000614944 A0A096LNJ9 63 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 FAM223BA6NKX1 122 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 NCBP2LA6PVI3 153 aaKnown RBP6.69□□□□□ -1.34
VPS11-206ENST00000614944 H3BUX3 64 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 HBDP02042 147 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 NDPQ00604 133 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 FAM223AQ8IWN6 122 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 C16orf92Q96LL3 132 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 FANCD2OSQ96PS1 177 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 PGPA6NDG6 321 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 PSMB8P28062 276 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
VPS11-206ENST00000614944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.69□□□□□ -1.343e-7■■■■□ 25
VPS11-206ENST00000614944 AKAP6Q13023 2319 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 K7EIM0 57 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 PEX7O00628 323 aa6.69□□□□□ -1.34
VPS11-206ENST00000614944 MED13LQ71F56 2210 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 IGKV1D-37A0A075B6S9 117 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 TRAV41A0A0B4J266 112 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 MRPS12O15235 138 aaKnown RBP6.68□□□□□ -1.34
VPS11-206ENST00000614944 MAPKAPK5-AS1Q8N8E1 139 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 TMEM167BQ9NRX6 74 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 PDZD2O15018 2839 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 ATP6V0E1O15342 81 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 UBE2D1P51668 147 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 ZMAT4Q9H898 229 aa6.68□□□□□ -1.34
VPS11-206ENST00000614944 TRAV12-2A0A075B6T6 113 aa6.67□□□□□ -1.34
VPS11-206ENST00000614944 TRBV7-1A0A0A6YYK4 115 aa6.67□□□□□ -1.34
VPS11-206ENST00000614944 IFI27P40305 119 aaPredicted RBP6.67□□□□□ -1.34
VPS11-206ENST00000614944 NPC2P61916 151 aa6.67□□□□□ -1.34
VPS11-206ENST00000614944 USMG5Q96IX5 58 aa6.67□□□□□ -1.34
VPS11-206ENST00000614944 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
VPS11-206ENST00000614944 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 IGHV3OR16-10A0A075B7F0 116 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 P01737 135 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 ELANEP08246 267 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 LEPP41159 167 aa6.66□□□□□ -1.34
VPS11-206ENST00000614944 TWIST1Q15672 202 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms